RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 SPIN1Q9Y657 262 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 DSPPQ9NZW4 1301 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 PLECQ15149 4684 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 A8MXK9 166 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 RSL1D1O76021 490 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 IGLL1P15814 213 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 MAKP20794 623 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 CAPZA2P47755 286 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 PRKAG1P54619 331 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 ALDH18A1P54886 795 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 SH3BGRP55822 239 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 RAE1P78406 368 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 BST1Q10588 318 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 TRAF3Q13114 568 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 FXNQ16595 210 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 TSTQ16762 297 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 PGBD2Q6P3X8 592 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 CYS1Q717R9 158 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 SZRD1Q7Z422 152 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 KLHL7Q8IXQ5 586 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 LYG1Q8N1E2 194 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 OR9K2Q8NGE7 335 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 TBC1D15Q8TC07 691 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 SNX33Q8WV41 574 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 TSPAN32Q96QS1 320 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 CPNE1Q99829 537 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 BRF2Q9HAW0 419 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 NMRAL1Q9HBL8 299 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 NKIRAS2Q9NYR9 191 aa12.19□□□□□ -0.46
CHMP2B-205ENST00000494980 SYCE1LA8MT33 242 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 ZNF264O43296 627 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 CLPTM1O96005 669 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 ZNF35P13682 527 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 DDCP20711 480 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 SLC6A9P48067 706 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 SELENOPP49908 381 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 HNRNPA0Q13151 305 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 LARS2Q15031 903 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 DHRS7BQ6IAN0 325 aaPredicted RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 ADAMTS15Q8TE58 950 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 PYROXD1Q8WU10 500 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 GPR22Q99680 433 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 THUMPD3Q9BV44 507 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 EBPLQ9BY08 206 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 NMUR2Q9GZQ4 415 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 CTPS2Q9NRF8 586 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 CHRNA9Q9UGM1 479 aa12.18□□□□□ -0.46
CHMP2B-205ENST00000494980 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 EIF3HO15372 352 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 UPK3AO75631 287 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 CYP7B1O75881 506 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 NHLRC4P0CG21 123 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 UBL4AP11441 157 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GALK2Q01415 458 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 HSPB3Q12988 150 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 FASTKD3Q14CZ7 662 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GPR157Q5UAW9 335 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 ZNF551Q7Z340 670 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 POU5F2Q8N7G0 328 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 NAA11Q9BSU3 229 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 MMP28Q9H239 520 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 ACER3Q9NUN7 267 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GRHL1Q9NZI5 618 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 TMEM181Q9P2C4 612 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 EGFL7Q9UHF1 273 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 IL20RAQ9UHF4 553 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GPR160Q9UJ42 338 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
CHMP2B-205ENST00000494980 CCDC189A1A4V9 331 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TMEM229AB2RXF0 380 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TP73O15350 636 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 MGRN1O60291 552 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 EIF4E2O60573 245 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 EIF1BO60739 113 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TGDSO95455 350 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 HSPA4LO95757 839 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 GSTA2P09210 222 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 SBK2P0C263 348 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 ATP6V1C1P21283 382 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 SLC35A1P78382 337 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 POU6F2P78424 691 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 GGTA1PQ4G0N0 100 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms