RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FEVQ99581 238 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 RBM4BQ9BQ04 359 aaKnown RBP11.15□□□□□ -0.62
SNX17-208ENST00000493711 TACO1Q9BSH4 297 aaKnown RBP11.15□□□□□ -0.62
SNX17-208ENST00000493711 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
SNX17-208ENST00000493711 VCXQ9H320 206 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 TP63Q9H3D4 680 aaPredicted RBP11.15□□□□□ -0.62
SNX17-208ENST00000493711 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 MRPL39Q9NYK5 338 aaKnown RBP11.15□□□□□ -0.62
SNX17-208ENST00000493711 RASD1Q9Y272 281 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 ZNF835Q9Y2P0 537 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 ORC6Q9Y5N6 252 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 CNTRLQ7Z7A1 2325 aa11.15□□□□□ -0.62
SNX17-208ENST00000493711 COL12A1Q99715 3063 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 UNC119BA6NIH7 251 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 B8ZZF3 427 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 CASQ2O14958 399 aaPredicted RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 KLF4O43474 513 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 CXCL13O43927 109 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 RCBTB2O95199 551 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 OR6A2O95222 327 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 HPRP00739 348 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 OPN1LWP04000 364 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 IMPDH2P12268 514 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 CDH2P19022 906 aaPredicted RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 CBLP22681 906 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 SHC1P29353 583 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 GRPRP30550 384 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 GSSP48637 474 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 SUCLG1P53597 346 aaKnown RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 IST1P53990 364 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 HSF1Q00613 529 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 PMS2P3Q13401 168 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 TRIP10Q15642 601 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 RFX4Q33E94 735 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 ZBED5Q49AG3 693 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 PRR30Q53SZ7 412 aaPredicted RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 C1QL3Q5VWW1 255 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 FAHD1Q6P587 224 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 Q6ZPB1 254 aaPredicted RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 ZBTB49Q6ZSB9 765 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 PRICKLE2Q7Z3G6 844 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 NANOGNBQ7Z5D8 188 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 ZER1Q7Z7L7 766 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 P3H2Q8IVL5 708 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 AQP11Q8NBQ7 271 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 FAM46AQ96IP4 442 aaKnown RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 SF3B5Q9BWJ5 86 aaKnown RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 PRRG4Q9BZD6 226 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 CHST11Q9NPF2 352 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 C20orf141Q9NUB4 165 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 TLN1Q9Y490 2541 aaKnown RBP11.14□□□□□ -0.63
SNX17-208ENST00000493711 MYO18BQ8IUG5 2567 aa11.14□□□□□ -0.63
SNX17-208ENST00000493711 LOC102725191A0A1B0GVB3 256 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 CD8B2A6NJW9 211 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 SAC3D1A6NKF1 404 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 AQP7P3A6NL99 342 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 SLC19A2O60779 497 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 GASTP01350 101 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 TPOP07202 933 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 ASAH2BP0C7U1 165 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 MAKP20794 623 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 FUT4P22083 530 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 MLLT10P55197 1068 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 H3F3AP84243 136 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 ZP4Q12836 540 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
SNX17-208ENST00000493711 PDK3Q15120 406 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 RNPS1Q15287 305 aaKnown RBP11.13□□□□□ -0.63
SNX17-208ENST00000493711 EIF2S3LQ2VIR3 472 aaKnown RBP11.13□□□□□ -0.63
SNX17-208ENST00000493711 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
SNX17-208ENST00000493711 OR2A2Q6IF42 318 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 SLC46A3Q7Z3Q1 461 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 FGD2Q7Z6J4 655 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 ADGRE4PQ86SQ3 457 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 CHERPQ8IWX8 916 aaKnown RBP11.13□□□□□ -0.63
SNX17-208ENST00000493711 PARP8Q8N3A8 854 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 CLDN22Q8N7P3 220 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 GALNT11Q8NCW6 608 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 OR9Q2Q8NGE9 314 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 TM9SF2Q99805 663 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 CIB1Q99828 191 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 TUBA1CQ9BQE3 449 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 USE1Q9NZ43 259 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 SPTA1P02549 2419 aa11.13□□□□□ -0.63
SNX17-208ENST00000493711 SLC22A20A6NK97 555 aa11.12□□□□□ -0.63
SNX17-208ENST00000493711 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms