RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PTPN13Q12923 2485 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 UTP20O75691 2785 aaKnown RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 HTR3EA5X5Y0 456 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 AQP7P3A6NL99 342 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 hCG_2039718K7EN88 272 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 GNGT2O14610 69 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 CASKO14936 926 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 RNF13O43567 381 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 CH25HO95992 272 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 H1F0P07305 194 aaKnown RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ADORA3P0DMS8 318 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 SAGP10523 405 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 CD8BP10966 210 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 HOXB6P17509 224 aaKnown RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 RHCEP18577 417 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 PTNP21246 168 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 GRPRP30550 384 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 HOXC12P31275 282 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 KIR2DL2P43627 348 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 SPIBQ01892 262 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 BNIP1Q12981 228 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 FLOT2Q14254 428 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 FGD3Q5JSP0 725 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 CASP12Q6UXS9 341 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 MEX3BQ6ZN04 569 aaKnown RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 H1FNTQ75WM6 255 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 NANOGNBQ7Z5D8 188 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ABHD12BQ7Z5M8 362 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 COMTD1Q86VU5 262 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 SPATA24Q86W54 205 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 P3H2Q8IVL5 708 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 CCDC103Q8IW40 242 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 UEVLDQ8IX04 471 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 OFCC1Q8IZS5 231 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 TMEM99Q8N816 258 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 SCAIQ8N9R8 606 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 OR6S1Q8NH40 331 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 TMEM239Q8WW34 195 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 TAAR8Q969N4 342 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 APH1AQ96BI3 265 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF775Q96BV0 537 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF524Q96C55 264 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 STARD4Q96DR4 205 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 KTI12Q96EK9 354 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 SGTBQ96EQ0 304 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 PSMG3-AS1Q96PY0 264 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 KCNK17Q96T54 332 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 PSD2Q9BQI7 771 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 AMBRA1Q9C0C7 1298 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 OPN3Q9H1Y3 402 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 MMADHCQ9H3L0 296 aaPredicted RBP7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 YY1AP1Q9H869 796 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 BCO1Q9HAY6 547 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ELOVL5Q9NYP7 299 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 RHCGQ9UBD6 479 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 AURKCQ9UQB9 309 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 B3GALT5Q9Y2C3 310 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 ENPP4Q9Y6X5 453 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 COL12A1Q99715 3063 aa7.25□□□□□ -1.25
TM4SF1-204ENST00000493348 A0A1W2PRG6 482 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 TUBAL3A6NHL2 446 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 OR6C65A6NJZ3 312 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF726A6NNF4 738 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ENO4A6NNW6 628 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 MCIDASD6RGH6 385 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 M0R082 166 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 HNRNPRO43390 633 aaKnown RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 SERPINI2O75830 405 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 TNFSF13O75888 250 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 GADD45GO95257 159 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 CLDN1O95832 211 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 MT-ND1P03886 318 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 RNF224P0DH78 156 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 IL32P24001 234 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 IFNGR2P38484 337 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 CD79BP40259 229 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 KIR2DL3P43628 341 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 CRYBA2P53672 197 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 PUDPQ08623 228 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ABLIM2Q6H8Q1 611 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 LCN8Q6JVE9 175 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 AAED1Q7RTV5 226 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 HDDC2Q7Z4H3 204 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 LIX1LQ8IVB5 337 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZDHHC21Q8IVQ6 265 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 RNF113BQ8IZP6 322 aaKnown RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF610Q8N9Z0 462 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 RELL2Q8NC24 303 aaPredicted RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 OR9K2Q8NGE7 335 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 OR4D11Q8NGI4 311 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 OR5J2Q8NH18 312 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF417Q8TAU3 575 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 TMEM255BQ8WV15 326 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 RSRC1Q96IZ7 334 aaKnown RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 CLPTM1LQ96KA5 538 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 OXGR1Q96P68 337 aa7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF300Q96RE9 604 aaPredicted RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF587Q96SQ5 575 aaPredicted RBP7.24□□□□□ -1.25
TM4SF1-204ENST00000493348 PIP5K1AQ99755 562 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms