RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 MAGEA2P43356 314 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CYB561P49447 251 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TMED10P49755 219 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 EIF2B2P49770 351 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 HTR6P50406 440 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 GZMMP51124 257 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 DGKQP52824 942 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CASP6P55212 293 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SLC26A5P58743 744 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TRA2BP62995 288 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CSNK2BP67870 215 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 PSPHP78330 225 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RPP38P78345 283 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SLC35A2P78381 396 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RHAGQ02094 409 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TNFRSF17Q02223 184 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 EMX1Q04741 257 aaPredicted RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TRAF3Q13114 568 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 FADDQ13158 208 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RUNX2Q13950 521 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 KEAP1Q14145 624 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 INAQ16352 499 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 BCL2A1Q16548 175 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CCDC92Q53HC0 331 aaPredicted RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ACER2Q5QJU3 275 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 LRIF1Q5T3J3 769 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SYT6Q5T7P8 510 aaPredicted RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SHQ1Q6PI26 577 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 HSDL2Q6YN16 418 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 MSANTD1Q6ZTZ1 278 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 COMMD6Q7Z4G1 85 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ADCK1Q86TW2 530 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 P2RY8Q86VZ1 359 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RPS19BP1Q86WX3 136 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 MSRB3Q8IXL7 192 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TAGAPQ8N103 731 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 FAM86B1Q8N7N1 296 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 TMEM178AQ8NBL3 297 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 B3GNT7Q8NFL0 401 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 OR7A2PQ8NGA2 310 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 OR4K14Q8NGD5 310 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 OR1N1Q8NGS0 311 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 OR10A6Q8NH74 314 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CDC26Q8NHZ8 85 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 WDR20Q8TBZ3 569 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 DYNC2LI1Q8TCX1 351 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 FAR1Q8WVX9 515 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SGCDQ92629 289 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RORBQ92753 470 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 HAS2Q92819 552 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RIT1Q92963 219 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 FAM162AQ96A26 154 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 PYURFQ96I23 114 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SGCZQ96LD1 299 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF300Q96RE9 604 aaPredicted RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 BBS4Q96RK4 519 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 MAPKAP1Q9BPZ7 522 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 THUMPD3Q9BV44 507 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 NUDT9Q9BW91 350 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 DGCR6LQ9BY27 220 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 DPY30Q9C005 99 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 OR8D2Q9GZM6 311 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 DUSP21Q9H596 190 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ARMC7Q9H6L4 198 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 KAT8Q9H7Z6 458 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 RMND5AQ9H871 391 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SP140LQ9H930 580 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 NRIP3Q9NQ35 241 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 SCN3BQ9NY72 215 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 VAPAQ9P0L0 249 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ERVK-11Q9UQG0 969 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 ENTPD4Q9Y227 616 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 YARS2Q9Y2Z4 477 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 FAM32AQ9Y421 112 aaKnown RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 MAGED1Q9Y5V3 778 aaPredicted RBP4.29□□□□□ -1.72
CSTF1-205ENST00000490539 A3GALT2U3KPV4 340 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 BSNQ9UPA5 3926 aa4.29□□□□□ -1.72
CSTF1-205ENST00000490539 CCDC88CQ9P219 2028 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 A0A0A6YYD5 115 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 IGHV3-20A0A0C4DH32 117 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 TRBV11-1A0A0K0K1C0 115 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 CLEC18AA5D8T8 446 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 OR5H15A6NDH6 313 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 CLDN24A6NM45 220 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 OR6C76A6NM76 312 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 A8MVJ9 347 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 E9PQ18 207 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 KLRC4-KLRK1H3BQV0 150 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 H7C1Q1 480 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 AP4M1O00189 453 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 RAB27BO00194 218 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 RTCAO00442 366 aaKnown RBP4.28□□□□□ -1.72
CSTF1-205ENST00000490539 PCDH7O60245 1069 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 LDB3O75112 727 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 E2F6O75461 281 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 ERAL1O75616 437 aaKnown RBP4.28□□□□□ -1.72
CSTF1-205ENST00000490539 NADKO95544 446 aaPredicted RBP4.28□□□□□ -1.72
CSTF1-205ENST00000490539 SERPINA1P01009 418 aa4.28□□□□□ -1.72
CSTF1-205ENST00000490539 ANXA4P09525 319 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms