RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CLEC20AQ6ZU45 233 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 NDUFAF7Q7L592 441 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 LINGO2Q7L985 606 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ANKRD33Q7Z3H0 272 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TECPR1Q7Z6L1 1165 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PEG10Q86TG7 708 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 COMTD1Q86VU5 262 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 VRK3Q8IV63 474 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 CMTM4Q8IZR5 234 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 BEST3Q8N1M1 668 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 UMODL1-AS1Q8N2C9 162 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MUC20Q8N307 709 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PRSS35Q8N3Z0 413 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 CELF5Q8N6W0 485 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 B3GALNT2Q8NCR0 500 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC30A7Q8NEW0 376 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 OR52B4Q8NGK2 314 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PAQR8Q8TEZ7 354 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TNFAIP8L1Q8WVP5 186 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 APOBEC4Q8WW27 367 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MYEOVQ96EZ4 313 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SAT2Q96F10 170 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 C1orf159Q96HA4 380 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 HSPA12BQ96MM6 686 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ZPBPQ9BS86 351 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 NDUFAF3Q9BU61 184 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 WRAP53Q9BUR4 548 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RHBGQ9H310 441 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 AUNIPQ9H7T9 357 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RHOFQ9HBH0 211 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 LHX9Q9NQ69 397 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM248Q9NWD8 314 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TAS2R10Q9NYW0 307 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GULP1Q9UBP9 304 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF236Q9UL36 1845 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GOLT1BQ9Y3E0 138 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SIRT4Q9Y6E7 314 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 NINQ8N4C6 2090 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SCN1AP35498 2009 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3DA0A087WVF3 549 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3IA0A087WXS9 549 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3EA0A087X179 549 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3KA0A087X1G2 549 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3FA6NER0 549 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 A8MWP6 167 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3LB9A6J9 549 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 F5H0A9 414 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 F8VVB4 439 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 F8VWA3 439 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ACOT7O00154 380 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CLDN5O00501 218 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MSTNO14793 375 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FMO6PO60774 539 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MOSPD3O75425 235 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FARS2O95363 451 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CD74P04233 296 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SERPINA5P05154 406 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SFTA3P0C7M3 94 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM157CP0CG43 387 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 HKR1P10072 659 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CKBP12277 381 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ELNP15502 786 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 BMP7P18075 431 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ARF4P18085 180 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ATF1P18846 271 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 DGKAP23743 735 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MPZP25189 248 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 NDUFS1P28331 727 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 PBLDP30039 288 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 IGFALSP35858 605 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ATP6V1E1P36543 226 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 PNPLA4P41247 253 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ADCYAP1R1P41586 468 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC6A11P48066 632 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CDH11P55287 796 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TAS2R43P59537 309 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ST8SIA6P61647 398 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 HTRA4P83105 476 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MEF2AQ02078 507 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SRSF5Q13243 272 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FZD5Q13467 585 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 NAE1Q13564 534 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 KIAA0141Q14154 515 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 GAMTQ14353 236 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 GRB14Q14449 540 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 NDUFAF6Q330K2 333 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF791Q3KP31 576 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MESTQ5EB52 335 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 KRBOX4Q5JUW0 171 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FBXO47Q5MNV8 452 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ARTNQ5T4W7 220 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ATXN7L2Q5T6C5 722 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 HIST2H3PS2Q5TEC6 136 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 NKAIN2Q5VXU1 208 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms