RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RNLSQ5VYX0 342 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 NXNL2Q5VZ03 156 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 BICRALQ6AI39 1079 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 JMJD6Q6NYC1 403 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 IL20RBQ6UXL0 311 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 DPY19L2P2Q6ZN68 376 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 STK35Q8TDR2 534 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 GPX7Q96SL4 187 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 TNRC6AQ8NDV7 1962 aaKnown RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 SETXQ7Z333 2677 aaKnown RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 PCNX3Q9H6A9 2034 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 C2orf72A6NCS6 295 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 RIIAD1A6NNX1 92 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 A8MVM7 634 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 LRRN3E7EW58 273 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 NPIPB7O75200 414 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 INMTO95050 263 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 PPP1R3DO95685 299 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 MT-ATP6P00846 226 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 IFNGP01579 166 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 PDGFAP04085 211 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 ACVR2AP27037 513 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 ZNF41P51814 821 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 MAP2K6P52564 334 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 Q0VFX4 171 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 RAB40BQ12829 278 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 FCRLBQ6BAA4 426 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 OR5M10Q6IEU7 315 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 CXXC5Q7LFL8 322 aaKnown RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 ADGRG3Q86Y34 549 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 C10orf53Q8N6V4 93 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 LRRC17Q8N6Y2 441 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
NELFE-209ENST00000488426 TMEM80Q96HE8 168 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 HPF1Q9NWY4 346 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 MED11Q9P086 117 aa11.51□□□□□ -0.57
NELFE-209ENST00000488426 MYO18BQ8IUG5 2567 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 CPAMD8Q8IZJ3 1885 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 B4DXG7 233 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 MASP2O00187 686 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 ARPC3O15145 178 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 IDH3BO43837 385 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 MAN1A2O60476 641 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 SLC2A10O95528 541 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 ZNF3P17036 446 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 HK1P19367 917 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 HTR1FP30939 366 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 MTNR1AP48039 350 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 ST13P50502 369 aaKnown RBP11.5□□□□□ -0.57
NELFE-209ENST00000488426 CDH11P55287 796 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 CRTC2Q53ET0 693 aaPredicted RBP11.5□□□□□ -0.57
NELFE-209ENST00000488426 GPALPP1Q8IXQ4 340 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 ALDH16A1Q8IZ83 802 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 OR2M3Q8NG83 312 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 TAAR8Q969N4 342 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 NTNG2Q96CW9 530 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 MRGPRX4Q96LA9 322 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 SGCZQ96LD1 299 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 MOGAT1Q96PD6 335 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 DOK1Q99704 481 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 ANGPTL4Q9BY76 406 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
NELFE-209ENST00000488426 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
NELFE-209ENST00000488426 CHRNA9Q9UGM1 479 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 KLHL21Q9UJP4 597 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 SLC6A5Q9Y345 797 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 COMMD3-BMI1R4GMX3 469 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 FLNCQ14315 2725 aa11.5□□□□□ -0.57
NELFE-209ENST00000488426 TMEM72A0PK05 275 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 NOL3O60936 208 aaKnown RBP11.49□□□□□ -0.57
NELFE-209ENST00000488426 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
NELFE-209ENST00000488426 RAB36O95755 333 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 BGLAPP02818 100 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 HIST1H2ABP04908 130 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 ADORA3P0DMS8 318 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
NELFE-209ENST00000488426 CCNA2P20248 432 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 PAICSP22234 425 aaKnown RBP11.49□□□□□ -0.57
NELFE-209ENST00000488426 NOS3P29474 1203 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 UQCRC1P31930 480 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 RPL4P36578 427 aaKnown RBP11.49□□□□□ -0.57
NELFE-209ENST00000488426 TMBIM6P55061 237 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 TMED1Q13445 227 aa11.49□□□□□ -0.57
NELFE-209ENST00000488426 ATP1A4Q13733 1029 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms