RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MAMDC2Q7Z304 686 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 PFN4Q8NHR9 129 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 ABHD3Q8WU67 409 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 INTS12Q96CB8 462 aaKnown RBP17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 SGTBQ96EQ0 304 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 MOGAT1Q96PD6 335 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 PSD2Q9BQI7 771 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 TACO1Q9BSH4 297 aaKnown RBP17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 SFXN3Q9BWM7 321 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 ARMC1Q9NVT9 282 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 MRPL39Q9NYK5 338 aaKnown RBP17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF229Q9UJW7 825 aa17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 ING1Q9UK53 422 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-208ENST00000487172 TRBV4-1A0A0J9YWV2 114 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF716A6NP11 495 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF724A8MTY0 619 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 LRRN3E7EW58 273 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 M0R082 166 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 KPNA4O00629 521 aaPredicted RBP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 CH25HO95992 272 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ASAH2BP0C7U1 165 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 CHRNB4P30926 498 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 OPRM1P35372 400 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 LSM11P83369 360 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 FOXF2Q12947 444 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 FOXD4Q12950 439 aaPredicted RBP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 FGD3Q5JSP0 725 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 TMEM225Q6GV28 225 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 H1FNTQ75WM6 255 aaPredicted RBP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 FAM214BQ7L5A3 538 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 SLC46A3Q7Z3Q1 461 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 CCDC103Q8IW40 242 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 MCEMP1Q8IX19 187 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 NRMQ8IXM6 262 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 C10orf67Q8IYJ2 551 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF808Q8N4W9 903 aaPredicted RBP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF417Q8TAU3 575 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ALPK1Q96QP1 1244 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ZNF587Q96SQ5 575 aaPredicted RBP17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 ASPNQ9BXN1 380 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 CHST11Q9NPF2 352 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 FANCFQ9NPI8 374 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 NANSQ9NR45 359 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 C20orf141Q9NUB4 165 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 KLHL13Q9P2N7 655 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 RASD1Q9Y272 281 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 LYVE1Q9Y5Y7 322 aa17.27■□□□□ 0.36
PCOLCE-208ENST00000487172 LOC102725191A0A1B0GVB3 256 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 A0A1W2PNV4 684 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 SH3PXD2BA1X283 911 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 ZG16O60844 167 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 RAMP1O60894 148 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TNFSF13O75888 250 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 OR7A10O76100 309 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 AGFG2O95081 481 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 CST1P01037 141 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 YES1P07947 543 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 IFI30P13284 250 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 FUT1P19526 365 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 KIR2DL2P43627 348 aaPredicted RBP17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 ERFP50548 548 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 POU4F3Q15319 338 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 SEC23BQ15437 767 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TBPL2Q6SJ96 375 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TMPRSS11FQ6ZWK6 438 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 MRGPRGQ86SM5 289 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 CDK20Q8IZL9 346 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 GCNT2Q8N0V5 402 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 LINC00471Q8N535 108 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 C10orf53Q8N6V4 93 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 OR5J2Q8NH18 312 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 OR52J3Q8NH60 311 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 ITLN2Q8WWU7 325 aaPredicted RBP17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 SDCCAG3Q96C92 435 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 BPIFA2Q96DR5 249 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 DENND2DQ9H6A0 471 aaPredicted RBP17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 REEP1Q9H902 201 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TMCC3Q9ULS5 477 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TMEM5Q9Y2B1 443 aa17.26■□□□□ 0.35
PCOLCE-208ENST00000487172 TNFRSF11BO00300 401 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 GPR171O14626 319 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 PIP5K1CO60331 668 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 PLGP00747 810 aaPredicted RBP17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 TSPAN19P0C672 248 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 CBLP22681 906 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 ZP4Q12836 540 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 KPNB1Q14974 876 aaKnown RBP17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 TMEM201Q5SNT2 666 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 CCDC71Q8IV32 467 aaPredicted RBP17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 OR4K5Q8NGD3 323 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 OR4C15Q8NGM1 316 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 LILRB4Q8NHJ6 448 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 C6orf203Q9P0P8 240 aaPredicted RBP17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 EMC9Q9Y3B6 208 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 AP4S1Q9Y587 144 aa17.25■□□□□ 0.35
PCOLCE-208ENST00000487172 MS4A18H0YCH9 400 aa17.24■□□□□ 0.35
PCOLCE-208ENST00000487172 PLPP3O14495 311 aa17.24■□□□□ 0.35
PCOLCE-208ENST00000487172 DVL2O14641 736 aa17.24■□□□□ 0.35
PCOLCE-208ENST00000487172 HNRNPRO43390 633 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms