RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ARL8AQ96BM9 186 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 WDR89Q96FK6 387 aaPredicted RBP6.96□□□□□ -1.3
XRN1-212ENST00000486211 C16orf58Q96GQ5 468 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 APIPQ96GX9 242 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 ALKBH3Q96Q83 286 aaPredicted RBP6.96□□□□□ -1.3
XRN1-212ENST00000486211 GAL3ST1Q99999 423 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 SLC30A2Q9BRI3 323 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 EBPLQ9BY08 206 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 OR11A1Q9GZK7 315 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 CRLF2Q9HC73 371 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 SERINC1Q9NRX5 453 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 TNFRSF19Q9NS68 423 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 NMRK1Q9NWW6 199 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 GIN1Q9NXP7 522 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 GUCA1BQ9UMX6 200 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 HDGFL3Q9Y3E1 203 aa6.96□□□□□ -1.3
XRN1-212ENST00000486211 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
XRN1-212ENST00000486211 IGHV1-69-2A0A0G2JMI3 117 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CCDC189A1A4V9 331 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 C17orf100A8MU93 164 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CLDN25C9JDP6 229 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 ZNF587BE7ETH6 402 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 H3BNH8 94 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 GTPBP1O00178 669 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 ZNF264O43296 627 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 DHHO43323 396 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 EIF4E2O60573 245 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 ULK1O75385 1050 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 SKAP2O75563 359 aaPredicted RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 RSL1D1O76021 490 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 HSPA4LO95757 839 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 MPIG6BO95866 241 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 IGHMP01871 453 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 BCKDHAP12694 445 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 ZNF35P13682 527 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 HSD3B1P14060 373 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 HSD3B2P26439 372 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 ARR3P36575 388 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CCR4P51679 360 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 OR2B6P58173 313 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 PAX8Q06710 450 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 C2orf80Q0P641 193 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 NPRL3Q12980 569 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 SKP2Q13309 424 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 FAM71E1Q6IPT2 247 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 Q6YL49 198 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 RAPH1Q70E73 1250 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 RPS27LQ71UM5 84 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 AAED1Q7RTV5 226 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 MDP1Q86V88 176 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 TMCO5AQ8N6Q1 288 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 PTGR2Q8N8N7 351 aaPredicted RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 COX18Q8N8Q8 333 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 IL17RDQ8NFM7 739 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 OR52E2Q8NGJ4 325 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 SGCDQ92629 289 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 PHF21AQ96BD5 680 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 GPR78Q96P69 363 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 MS4A4EQ96PG1 132 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CPNE1Q99829 537 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 MRI1Q9BV20 369 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 THUMPD3Q9BV44 507 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 CCDC106Q9BWC9 280 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 BTBD2Q9BX70 525 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 ACPTQ9BZG2 426 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 TRIM5Q9C035 493 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CTPS2Q9NRF8 586 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 ACER3Q9NUN7 267 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 CPSF2Q9P2I0 782 aaKnown RBP6.95□□□□□ -1.3
XRN1-212ENST00000486211 CHRNA9Q9UGM1 479 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 FZR1Q9UM11 496 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 SNX6Q9UNH7 406 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 TRAPPC4Q9Y296 219 aa6.95□□□□□ -1.3
XRN1-212ENST00000486211 E7ESA3 106 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 MANBAO00462 879 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 TP73O15350 636 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 UPK3AO75631 287 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 URI1O94763 535 aaPredicted RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 ANXA4P09525 319 aaPredicted RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 ALOX5P09917 674 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 PPIAL4GP0DN37 164 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 UBL4AP11441 157 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 IMPDH2P12268 514 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 CRABP2P29373 138 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 CD80P33681 288 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 GSTM5P46439 218 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 SELENOPP49908 381 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 PRKAG1P54619 331 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ATP12AP54707 1039 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 POU6F2P78424 691 aaPredicted RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 ACSM2AQ08AH3 577 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ZNF763Q0D2J5 394 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 HSPB3Q12988 150 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 LCP2Q13094 533 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ALKBH6Q3KRA9 238 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 SPIN4Q56A73 249 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ACSM2BQ68CK6 577 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 CDC73Q6P1J9 531 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 PAQR6Q6TCH4 344 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms