RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PSKH2Q96QS6 385 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 SECISBP2Q96T21 854 aaKnown RBP1.85□□□□□ -2.11
GCFC2-209ENST00000486016 ARHGDIGQ99819 225 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 CAPS2Q9BXY5 557 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 SH2D2AQ9NP31 389 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 INPP5EQ9NRR6 644 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 KIF25Q9UIL4 384 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 CLEC4AQ9UMR7 237 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 PRPF19Q9UMS4 504 aaKnown RBP1.85□□□□□ -2.11
GCFC2-209ENST00000486016 PNPLA6Q8IY17 1366 aa1.85□□□□□ -2.11
GCFC2-209ENST00000486016 LRP4O75096 1905 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ATAD2BQ9ULI0 1458 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 IGHV3OR16-13A0A075B7E8 117 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 A0A096LNJ9 63 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM150BA6NC51 233 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NKX2-6A6NCS4 301 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 HELTA6NFD8 242 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 IDSB3KWA1 339 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 POLR2DO15514 142 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ZNF208O43345 1280 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RIPK2O43353 540 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 HCRTR1O43613 425 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 PRKAB2O43741 272 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ZNF780AO75290 641 aaPredicted RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SURF6O75683 361 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ATP5LO75964 103 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 DIRAS1O95057 198 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SNAPINO95295 136 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 STAMBPO95630 424 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 AP2A1O95782 977 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 LGI1O95970 557 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 IL1BP01584 269 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 IGLV3-19P01714 112 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 OPN1MWP04001 364 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CAPN1P07384 714 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 OPN1MW2P0DN77 364 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 OPN1MW3P0DN78 364 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CCDC130P13994 396 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 POU2F1P14859 743 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NCK1P16333 377 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NPR2P20594 1047 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ATP6V1B2P21281 511 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CALRP27797 417 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CALCRP30988 508 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RPL13AP40429 203 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 QARSP47897 775 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CCT3P49368 545 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 APOC4P55056 127 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 PKNOX1P55347 436 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 KLRB1Q12918 225 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RIPK1Q13546 671 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SLC15A2Q16348 729 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 PDZK1Q5T2W1 519 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 OR2G6Q5TZ20 316 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CENPPQ6IPU0 288 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 Q6ZPB1 254 aaPredicted RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CCDC65Q8IXS2 484 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ZCCHC7Q8N3Z6 543 aaKnown RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 MFSD9Q8NBP5 474 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 ZNF740Q8NDX6 193 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 MAIP1Q8WWC4 291 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 FGF11Q92914 225 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RNF185Q96GF1 192 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SLC41A3Q96GZ6 507 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SLC38A2Q96QD8 506 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NPAS2Q99743 824 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CCT7Q99832 543 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM43Q9BTV4 400 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RAB34Q9BZG1 259 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NT5C3AQ9H0P0 336 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 NARFLQ9H6Q4 476 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 SUDS3Q9H7L9 328 aaPredicted RBP1.84□□□□□ -2.11
GCFC2-209ENST00000486016 YY1AP1Q9H869 796 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 FOLH1BQ9HBA9 442 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 TREM2Q9NZC2 230 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 BTNL2Q9UIR0 455 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 CDH9Q9ULB4 789 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 STAP1Q9ULZ2 295 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 COPS3Q9UNS2 423 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 TP53TG5Q9Y2B4 290 aa1.84□□□□□ -2.11
GCFC2-209ENST00000486016 RPAP1Q9BWH6 1393 aaPredicted RBP1.84□□□□□ -2.12
GCFC2-209ENST00000486016 IGHV1OR21-1A0A087WYE8 117 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 CLRN2A0PK11 232 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 A6NIZ1 184 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 HIP1O00291 1037 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 MED7O43513 233 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RAMP3O60896 148 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 DBTP11182 482 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 IGFBP3P17936 291 aaPredicted RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 GNA11P29992 359 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SHMT2P34897 504 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RDXP35241 583 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RFC4P35249 363 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 DDOSTP39656 456 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 KLK7P49862 253 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 DUSP3P51452 185 aaPredicted RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 AIF1P55008 147 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RAP1BP61224 184 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 TGFBR3Q03167 851 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ZNF763Q0D2J5 394 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms