RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 EPYCQ99645 322 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 CGREF1Q99674 301 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 CPPED1Q9BRF8 314 aaPredicted RBP13.5□□□□□ -0.25
CDK9-203ENST00000480353 C1QTNF6Q9BXI9 259 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 TMEM120AQ9BXJ8 343 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
CDK9-203ENST00000480353 C12orf10Q9HB07 376 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 DLL4Q9NR61 685 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 CHST2Q9Y4C5 530 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 A0A1B0GWA3 101 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 TMEM229AB2RXF0 380 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 H7C1Q1 480 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 AIM2O14862 343 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
CDK9-203ENST00000480353 SASH3O75995 380 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 ITGA5P08648 1049 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 NQO1P15559 274 aaKnown RBP13.49□□□□□ -0.25
CDK9-203ENST00000480353 NTF4P34130 210 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 PRPS1P60891 318 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 RBBP4Q09028 425 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 HMBOX1Q6NT76 420 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 DLEU7Q6UYE1 221 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
CDK9-203ENST00000480353 LSRQ86X29 649 aaPredicted RBP13.49□□□□□ -0.25
CDK9-203ENST00000480353 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 ANKRD27Q96NW4 1050 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 MUS81Q96NY9 551 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 ZNF385AQ96PM9 386 aaKnown RBP13.49□□□□□ -0.25
CDK9-203ENST00000480353 ASPNQ9BXN1 380 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 SLC52A3Q9NQ40 469 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 SLC25A15Q9Y619 301 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 GMEB1Q9Y692 573 aa13.49□□□□□ -0.25
CDK9-203ENST00000480353 TRAV36DV7A0A075B6V5 113 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 TRBV5-3A0A0A0MS03 114 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 TPST1O60507 370 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 CBLP22681 906 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 CDKN1AP38936 164 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 ARFIP2P53365 341 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 CLDN17P56750 224 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 UBE2NP61088 152 aaKnown RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 CYLC2Q14093 348 aaPredicted RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 MFSD13AQ14CX5 517 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 MAPRE2Q15555 327 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 FAM69AQ5T7M9 428 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 INTS11Q5TA45 600 aaKnown RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 FAM91A1Q658Y4 838 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 CREB3L2Q70SY1 520 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 Q71RC1 249 aaPredicted RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 C10orf111Q8N326 155 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 DPP10Q8N608 796 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 KTI12Q96EK9 354 aaPredicted RBP13.48□□□□□ -0.25
CDK9-203ENST00000480353 HS6ST2Q96MM7 605 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 SH3GL1Q99961 368 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 ATP23Q9Y6H3 246 aa13.48□□□□□ -0.25
CDK9-203ENST00000480353 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
CDK9-203ENST00000480353 NPIPB7O75200 414 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 SLC43A1O75387 559 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 OPN1SWP03999 348 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 SOD3P08294 240 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 PAX1P15863 534 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 CD40P25942 277 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 HTR2AP28223 471 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 SELENOPP49908 381 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 FOXG1P55316 489 aaPredicted RBP13.47□□□□□ -0.25
CDK9-203ENST00000480353 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.251e-9■■■■□ 19.8
CDK9-203ENST00000480353 VEZF1Q14119 521 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 OR1Q1Q15612 314 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 ETFDHQ16134 617 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 GLIPR1L2Q4G1C9 344 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 C6orf89Q6UWU4 347 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 PATL1Q86TB9 770 aaKnown RBP13.47□□□□□ -0.25
CDK9-203ENST00000480353 FBXL14Q8N1E6 418 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 KDM8Q8N371 416 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 GPR137CQ8N3F9 429 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 OR10A6Q8NH74 314 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 ALKBH3Q96Q83 286 aaPredicted RBP13.47□□□□□ -0.25
CDK9-203ENST00000480353 MCHR1Q99705 422 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 ZNF701Q9NV72 531 aaPredicted RBP13.47□□□□□ -0.25
CDK9-203ENST00000480353 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
CDK9-203ENST00000480353 VPS13CQ709C8 3753 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 SHISA9B4DS77 424 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 M0QX08 132 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 M0R082 166 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 MFN2O95140 757 aa13.46□□□□□ -0.25
CDK9-203ENST00000480353 DANCRP0C864 163 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms