RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PCDHGB4Q9UN71 923 aa9.02□□□□□ -0.97
SMURF1-204ENST00000480055 SLC35A3Q9Y2D2 325 aa9.02□□□□□ -0.97
SMURF1-204ENST00000480055 SLC9A8Q9Y2E8 581 aa9.02□□□□□ -0.97
SMURF1-204ENST00000480055 IGHV4-61A0A0C4DH41 118 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 RNF103-CHMP3A0A140T963 221 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 LOC390937A0A1W2PQ73 354 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 DNPH1O43598 174 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 TCF21O43680 179 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 NPHS1O60500 1241 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
SMURF1-204ENST00000480055 DNAJA2O60884 412 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 ATP5HO75947 161 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 UBOX5O94941 541 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 ATP6V1G2O95670 118 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 FGF4P08620 206 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 OR12D1P0DN82 309 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 CFPP27918 469 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 MPGP29372 298 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 NOS3P29474 1203 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 PGM1P36871 562 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 SERPINF1P36955 418 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 SRP14P37108 136 aaKnown RBP9.01□□□□□ -0.97
SMURF1-204ENST00000480055 HTR3AP46098 478 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 SLC16A1P53985 500 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 HPCAP84074 193 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 SLC25A3Q00325 362 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 MPP2Q14168 576 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 PCLAFQ15004 111 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 MAPK14Q16539 360 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 CR1LQ2VPA4 569 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 UGT3A2Q3SY77 523 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 TSPO2Q5TGU0 170 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 ADGRG3Q86Y34 549 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 CLECL1Q8IZS7 167 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 C1orf162Q8NEQ5 155 aaPredicted RBP9.01□□□□□ -0.97
SMURF1-204ENST00000480055 DYDC1Q8WWB3 177 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 TUBGCP3Q96CW5 907 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 MYOZ1Q9NP98 299 aaPredicted RBP9.01□□□□□ -0.97
SMURF1-204ENST00000480055 FGFR1OP2Q9NVK5 253 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 TRAPPC4Q9Y296 219 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 WDR45Q9Y484 360 aa9.01□□□□□ -0.97
SMURF1-204ENST00000480055 TMED7-TICAM2A0A0A6YYA0 188 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 VGLL3A8MV65 326 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 SCN2BO60939 215 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 BCAS1O75363 584 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 CPSF4O95639 269 aaKnown RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 AGR2O95994 175 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 CRYAAP02489 173 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ERCC1P07992 297 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 G6PDP11413 515 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 NQO1P15559 274 aaKnown RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 CREB1P16220 341 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ZNF23P17027 643 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ITGA2P17301 1181 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ALDH3A1P30838 453 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 UBE2NP61088 152 aaKnown RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 KCNJ10P78508 379 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 DOC2BQ14184 412 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 MST1LQ2TV78 715 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 GPAT3Q53EU6 434 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 HIKESHIQ53FT3 197 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 C6orf136Q5SQH8 315 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 OR4F3Q6IEY1 312 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 TYW3Q6IPR3 259 aaKnown RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 CGB2Q6NT52 195 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 TNFAIP8L2Q6P589 184 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 AAED1Q7RTV5 226 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 GPAT4Q86UL3 456 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 RAB8BQ92930 207 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 AURKBQ96GD4 344 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 C1orf159Q96HA4 380 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 C3orf30Q96M34 536 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ANKRD27Q96NW4 1050 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 BPESC1Q9GZL8 116 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ZNF350Q9GZX5 532 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 RAB1BQ9H0U4 201 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 SERHL2Q9H4I8 314 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9□□□□□ -0.97
SMURF1-204ENST00000480055 TMEM45AQ9NWC5 275 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 TMED7Q9Y3B3 224 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 FLVCR1Q9Y5Y0 555 aa9□□□□□ -0.97
SMURF1-204ENST00000480055 IGHV1-18A0A0C4DH31 117 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 TMEM72A0PK05 275 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 LRP5LA4QPB2 252 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 VSTM5A8MXK1 200 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 B9A039 149 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 PDLIM1O00151 329 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 KCNAB3O43448 404 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 TYROBPO43914 113 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 HNRNPCL1O60812 293 aaKnown RBP8.99□□□□□ -0.97
SMURF1-204ENST00000480055 SNUPNO95149 360 aaKnown RBP8.99□□□□□ -0.97
SMURF1-204ENST00000480055 OR4A8P0C604 315 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 UQCRBP14927 111 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 TACR3P29371 465 aa8.99□□□□□ -0.97
SMURF1-204ENST00000480055 CHI3L1P36222 383 aaPredicted RBP8.99□□□□□ -0.97
SMURF1-204ENST00000480055 SLC1A3P43003 542 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms