RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CDHR4A6H8M9 788 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 B9A039 149 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 HAX1O00165 279 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 VAMP5O95183 116 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 AHSA1O95433 338 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 IL12AP29459 219 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 TUBA1BP68363 451 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 TUBA4AP68366 448 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 LARS2Q15031 903 aaKnown RBP11.54□□□□□ -0.56
VCL-205ENST00000478896 MST1LQ2TV78 715 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 C1orf140Q5VVS0 124 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 TUBA1AQ71U36 451 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 ZIC4Q8N9L1 334 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 TMEM109Q9BVC6 243 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 ARMC7Q9H6L4 198 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
VCL-205ENST00000478896 HAO1Q9UJM8 370 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 ZNF443Q9Y2A4 671 aaPredicted RBP11.54□□□□□ -0.56
VCL-205ENST00000478896 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 A0A096LPI6 279 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 SLC35F4A4IF30 521 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 NR5A2O00482 541 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 SDHDO14521 159 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 PDE5AO76074 875 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 ERCC1P07992 297 aaPredicted RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 OR4A8P0C604 315 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 CECR9P0C854 216 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 ETFAP13804 333 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 EPHA3P29320 983 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 ACAA2P42765 397 aaKnown RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 DSTNP60981 165 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 SRSF2Q01130 221 aaKnown RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 NAAAQ02083 359 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 BST1Q10588 318 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 RPS26P11Q5JNZ5 115 aaPredicted RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 RNF220Q5VTB9 566 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 NXNQ6DKJ4 435 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 CREB3L2Q70SY1 520 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 GLB1L3Q8NCI6 653 aaPredicted RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 ZNF540Q8NDQ6 660 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 SLC25A36Q96CQ1 311 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 MSI2Q96DH6 328 aaKnown RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 FOXN4Q96NZ1 517 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 C19orf24Q9BVV8 132 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 RAB1BQ9H0U4 201 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 MOV10Q9HCE1 1003 aaKnown RBP11.53□□□□□ -0.56
VCL-205ENST00000478896 RASD1Q9Y272 281 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 DSPPQ9NZW4 1301 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 ATRQ13535 2644 aa11.53□□□□□ -0.56
VCL-205ENST00000478896 ARPC4-TTLL3A0A0A6YYG9 625 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 TRPC5OSA6NMA1 111 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 UPK3AO75631 287 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 TGFAP01135 160 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 IL6P05231 212 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 TFPTP0C1Z6 253 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 KITP10721 976 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ZNF43P17038 809 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 RPS5P46782 204 aaKnown RBP11.52□□□□□ -0.57
VCL-205ENST00000478896 PPOXP50336 477 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 P2RY4P51582 365 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 SH3BGRP55822 239 aaPredicted RBP11.52□□□□□ -0.57
VCL-205ENST00000478896 CLDN17P56750 224 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ROR2Q01974 943 aaKnown RBP11.52□□□□□ -0.57
VCL-205ENST00000478896 NPRL3Q12980 569 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ADIPOQQ15848 244 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ANKRD16Q6P6B7 361 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 SERPINA11Q86U17 422 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ANKRD42Q8N9B4 389 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 OR4F15Q8NGB8 312 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 TMEM19Q96HH6 336 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ZNF317Q96PQ6 595 aaPredicted RBP11.52□□□□□ -0.57
VCL-205ENST00000478896 WDR55Q9H6Y2 383 aaPredicted RBP11.52□□□□□ -0.57
VCL-205ENST00000478896 RMND5AQ9H871 391 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 GPR45Q9Y5Y3 372 aa11.52□□□□□ -0.57
VCL-205ENST00000478896 VSTM5A8MXK1 200 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 PNMTP11086 282 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 IDO1P14902 403 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 ZNF23P17027 643 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 CALCRP30988 508 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 THBS2P35442 1172 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 CAPZA2P47755 286 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 IDH3GP51553 393 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 MAPK11Q15759 364 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 EFNB3Q15768 340 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 C6orf10Q5SRN2 563 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms