RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 AP4B1Q9Y6B7 739 aa8.32□□□□□ -1.08
PGK1-204ENST00000477335 TLN1Q9Y490 2541 aaKnown RBP8.32□□□□□ -1.08
PGK1-204ENST00000477335 ZNF407Q9C0G0 2248 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 MCIDASD6RGH6 385 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 PLPP3O14495 311 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 AQP7O14520 342 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SMAD9O15198 467 aaKnown RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 HCN1O60741 890 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 AKR7A3O95154 331 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 PMS2P2O95744 297 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ACTL6AO96019 429 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SAGP10523 405 aaPredicted RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 OSMP13725 252 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 HLA-DOBP13765 273 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ENPP1P22413 925 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 IFNGR2P38484 337 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 CLK1P49759 484 aaKnown RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 MAP2K6P52564 334 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ADARB1P78563 741 aaKnown RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 DBPQ10586 325 aaPredicted RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 KLRB1Q12918 225 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.084e-6■□□□□ 10.9
PGK1-204ENST00000477335 ZBED5Q49AG3 693 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 C6orf52Q5T4I8 152 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 HBMQ6B0K9 141 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ACSM5Q6NUN0 579 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 RRM2BQ7LG56 351 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 OAFQ86UD1 273 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 CCDC103Q8IW40 242 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 KDM8Q8N371 416 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 TMEM99Q8N816 258 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 TEX19Q8NA77 164 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SDCCAG3Q96C92 435 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 GPR137Q96N19 417 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SLX1AQ9BQ83 275 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 TUBA1CQ9BQE3 449 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 GRIP2Q9C0E4 1043 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 RASSF4Q9H2L5 321 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 OR52D1Q9H346 318 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 RIBC2Q9H4K1 309 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 LDAHQ9H6V9 325 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 NANSQ9NR45 359 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ASF1BQ9NVP2 202 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ALKBH4Q9NXW9 302 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SMPD3Q9NY59 655 aaPredicted RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 MRPL39Q9NYK5 338 aaKnown RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 ZNF229Q9UJW7 825 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 HIF3AQ9Y2N7 669 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 HDGFL3Q9Y3E1 203 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 SPIN1Q9Y657 262 aaPredicted RBP8.31□□□□□ -1.08
PGK1-204ENST00000477335 CDH10Q9Y6N8 788 aa8.31□□□□□ -1.08
PGK1-204ENST00000477335 ZAR1LA6NP61 321 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 MS4A18H0YCH9 400 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 LINC01387J3KSC0 135 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 SULT2B1O00204 365 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 BHLHE40O14503 412 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 IMPA2O14732 288 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 PPP1R3DO95685 299 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CLIC3O95833 236 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CRYABP02511 175 aaKnown RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 GNAO1P09471 354 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CPN1P15169 458 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CRISP1P54107 249 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 H3F3AP84243 136 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 RPL18Q07020 188 aaKnown RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 COX10Q12887 443 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 NPRL3Q12980 569 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 MS4A18Q3C1V0 323 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 EMC4Q5J8M3 183 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CLEC12AQ5QGZ9 265 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 SMARCD3Q6STE5 483 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 FAM180AQ6UWF9 173 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 C5orf46Q6UWT4 87 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 ESPNLQ6ZVH7 1005 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 MAMDC2Q7Z304 686 aaPredicted RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 CLDN22Q8N7P3 220 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 OR5J2Q8NH18 312 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 FAR1Q8WVX9 515 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 DNAJC9Q8WXX5 260 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 ROBO4Q8WZ75 1007 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 OSTF1Q92882 214 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 BBC3Q96PG8 261 aaPredicted RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 PITX2Q99697 317 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 PRDM14Q9GZV8 571 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 EXO5Q9H790 373 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 ZNF556Q9HAH1 456 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 CHST11Q9NPF2 352 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 FAM118AQ9NWS6 357 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 IL20Q9NYY1 176 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 KLHL13Q9P2N7 655 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 ING1Q9UK53 422 aaPredicted RBP8.3□□□□□ -1.08
PGK1-204ENST00000477335 TRAPPC4Q9Y296 219 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 PCDHGB5Q9Y5G0 923 aa8.3□□□□□ -1.08
PGK1-204ENST00000477335 KIAA1549Q9HCM3 1950 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms