RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CORINQ9Y5Q5 1042 aa5.97□□□□□ -1.45
ATG4A-207ENST00000474825 TRAV27A0A087WT01 109 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR5H15A6NDH6 313 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 EFCAB10A6NFE3 127 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 LIPT2A6NK58 231 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 J3QRE1 110 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 KPNA4O00629 521 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 PRODHO43272 600 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TLX3O43711 291 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TLX2O43763 284 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 XPNPEP2O43895 674 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ENTPD6O75354 484 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SMNDC1O75940 238 aaKnown RBP eCLIP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 GLSO94925 669 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 NUDT14O95848 222 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 IGHMP01871 453 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 P04436 131 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 HPNP05981 417 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CDK1P06493 297 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CD14P08571 375 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SAGP10523 405 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 IMPDH2P12268 514 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 PCMT1P22061 227 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ITGA3P26006 1051 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 DPP4P27487 766 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 FMO3P31513 532 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CASRP41180 1078 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF41P51814 821 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CDH15P55291 814 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TPD52P55327 224 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 RELBQ01201 579 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CDC20Q12834 499 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SELENBP1Q13228 472 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SRSF6Q13247 344 aaKnown RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SNAPC1Q16533 368 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SMN1Q16637 294 aaKnown RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 EMC4Q5J8M3 183 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ATP1A1-AS1Q5TC04 95 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 PRAMEF20Q5VT98 475 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 AGAP7PQ5VUJ5 663 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 NXNL2Q5VZ03 156 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 GTF2IRD2BQ6EKJ0 949 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 XAF1Q6GPH4 301 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 C3orf33Q6P1S2 294 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 BORAQ6PGQ7 559 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ASB18Q6ZVZ8 466 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 PRSS48Q7RTY5 328 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 MAMDC2Q7Z304 686 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 GTF2IRD2Q86UP8 949 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TCEANCQ8N8B7 351 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF248Q8NDW4 579 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 BPIFB6Q8NFQ5 453 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR2M7Q8NG81 312 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR4K17Q8NGC6 315 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR52L1Q8NGH7 329 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR1J4Q8NGS1 313 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 OR51A7Q8NH64 312 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SGCDQ92629 289 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 GGHQ92820 318 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 PTP4A1Q93096 173 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 DDIT4LQ96D03 193 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 DTNBP1Q96EV8 351 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF582Q96NG8 517 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 AGAP4Q96P64 663 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 GNRHR2Q96P88 292 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SIGLEC12Q96PQ1 595 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SNX18Q96RF0 628 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 FAM173AQ9BQD7 235 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TUBA1CQ9BQE3 449 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 JAM3Q9BX67 310 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CDCA4Q9BXL8 241 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TEX12Q9BXU0 123 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 NMNAT2Q9BZQ4 307 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 FGF20Q9NP95 211 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 ZFP64Q9NPA5 681 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 NANSQ9NR45 359 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SERINC1Q9NRX5 453 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 RASSF1Q9NS23 344 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TBC1D23Q9NUY8 699 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CLN6Q9NWW5 311 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 HAO2Q9NYQ3 351 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TAS2R5Q9NYW4 299 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 TVP23BQ9NYZ1 205 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 AASSQ9UDR5 926 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 HDGFL3Q9Y3E1 203 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 SPIN1Q9Y657 262 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 URB1O60287 2271 aaKnown RBP5.96□□□□□ -1.46
ATG4A-207ENST00000474825 EPG5Q9HCE0 2579 aa5.96□□□□□ -1.46
ATG4A-207ENST00000474825 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 A0A0G2JMM0 328 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1W2PNV4 684 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1W2PPB8 328 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1W2PRS3 328 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 OR2M5A3KFT3 312 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 DPPA5A6NC42 116 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 PINLYPA6NC86 204 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ARGFXA6NJG6 315 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 KIR3DP1A8MWS1 328 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms