RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TIGARQ9NQ88 270 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 DCAF13Q9NV06 445 aaKnown RBP11.65□□□□□ -0.54
TPM3-216ENST00000473036 GALNT8Q9NY28 637 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 ABCA4P78363 2273 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 IGKV3D-15A0A087WSY6 115 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 LRRN3E7EW58 273 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 ACOT8O14734 319 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 MSTNO14793 375 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 FFAR1O14842 300 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 ARPC2O15144 300 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 SMNDC1O75940 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
TPM3-216ENST00000473036 AKR7A3O95154 331 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 SERPINA1P01009 418 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 GPIP06744 558 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 CD8BP10966 210 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 FKBP2P26885 142 aaKnown RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 UQCRC1P31930 480 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 IFNA8P32881 189 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 IDUAP35475 653 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 RPS5P46782 204 aaKnown RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 MAP2K6P52564 334 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 CSNK2A1P68400 391 aaPredicted RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.55
TPM3-216ENST00000473036 RASGEF1BQ0VAM2 473 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 PIN1Q13526 163 aaPredicted RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 ZFP1Q6P2D0 407 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 MEX3BQ6ZN04 569 aaKnown RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 OR6K3Q8NGY3 331 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 DNAJA4Q8WW22 397 aaPredicted RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 PROX1Q92786 737 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 AMBRA1Q9C0C7 1298 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 PIGMQ9H3S5 423 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 TMEM27Q9HBJ8 222 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 A4GNTQ9UNA3 340 aa11.64□□□□□ -0.55
TPM3-216ENST00000473036 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
TPM3-216ENST00000473036 ELOA3DA6NLF2 546 aaPredicted RBP11.63□□□□□ -0.55
TPM3-216ENST00000473036 J3KTA2 159 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 DNPH1O43598 174 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 BGLAPP02818 100 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 YES1P07947 543 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 ITGA2P17301 1181 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC16A1P53985 500 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 ACTR3P61158 418 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC35A1P78382 337 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 RNPS1Q15287 305 aaKnown RBP11.63□□□□□ -0.55
TPM3-216ENST00000473036 ELOA3BQ3SY89 546 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 IQCCQ4KMZ1 466 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 FAM98BQ52LJ0 330 aaKnown RBP11.63□□□□□ -0.55
TPM3-216ENST00000473036 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 TFAP2EQ6VUC0 442 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 RANBP3LQ86VV4 465 aaPredicted RBP11.63□□□□□ -0.55
TPM3-216ENST00000473036 NKAIN4Q8IVV8 208 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 WDFY1Q8IWB7 410 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 KDM8Q8N371 416 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 ELOA3Q8NG57 546 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 NINJ1Q92982 152 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 STMN2Q93045 179 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC47A1Q96FL8 570 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 HSH2DQ96JZ2 352 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 MOGAT1Q96PD6 335 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 RBM24Q9BX46 236 aaKnown RBP11.63□□□□□ -0.55
TPM3-216ENST00000473036 MAGIXQ9H6Y5 334 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 MAN2C1Q9NTJ4 1040 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 RPS6KB2Q9UBS0 482 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 PRSS50Q9UI38 385 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC7A7Q9UM01 511 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 PROCRQ9UNN8 238 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 SLC9A8Q9Y2E8 581 aa11.63□□□□□ -0.55
TPM3-216ENST00000473036 TRAPPC13A5PLN9 417 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 ZNF724A8MTY0 619 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 CHP2O43745 196 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 FKBP6O75344 327 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 PRSS23O95084 383 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 ZNF682O95780 498 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 PLGP00747 810 aaPredicted RBP11.62□□□□□ -0.55
TPM3-216ENST00000473036 PNMTP11086 282 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 CD99P14209 185 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 CBLP22681 906 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 YAP1P46937 504 aaKnown RBP11.62□□□□□ -0.55
TPM3-216ENST00000473036 CHRNB3Q05901 458 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 PDK3Q15120 406 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 NHLRC1Q6VVB1 395 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 DEF8Q6ZN54 512 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 FKBP9P1Q75LS8 142 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 SPATA24Q86W54 205 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 MFSD8Q8NHS3 518 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 LINC01560Q8TB33 94 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 UTP4Q969X6 686 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms