RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 LSRQ86X29 649 aaPredicted RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 P3H2Q8IVL5 708 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 ZNF100Q8IYN0 542 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 SCAIQ8N9R8 606 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 FAM156AQ8NDB6 213 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 ADPRHL1Q8NDY3 354 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 OR9K2Q8NGE7 335 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 TMEM45BQ96B21 275 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 ZNF775Q96BV0 537 aaPredicted RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 PRRC1Q96M27 445 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 HS6ST2Q96MM7 605 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 DACH2Q96NX9 599 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 HDHD5Q9BXW7 423 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 AMBRA1Q9C0C7 1298 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 CRIM1Q9NZV1 1036 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 NDRG3Q9UGV2 375 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 ANKHD1Q8IWZ3 2542 aaKnown RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 LOC102725191A0A1B0GVB3 256 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 MRPL33O75394 65 aaKnown RBP13.55□□□□□ -0.24
SDC3-203ENST00000471567 IGF2P01344 180 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 BGLAPP02818 100 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 EPXP11678 715 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 GRPRP30550 384 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 LTBQ06643 244 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 SNTB1Q13884 538 aaKnown RBP13.55□□□□□ -0.24
SDC3-203ENST00000471567 P2RY6Q15077 328 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 Q6ZT83 130 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 GABRG1Q8N1C3 465 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 APH1AQ96BI3 265 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 NSMCE2Q96MF7 247 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 OXGR1Q96P68 337 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 ASPNQ9BXN1 380 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 OR10A4Q9H209 315 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 TAS2R1Q9NYW7 299 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
SDC3-203ENST00000471567 PRPF19Q9UMS4 504 aaKnown RBP13.55□□□□□ -0.24
SDC3-203ENST00000471567 A4GNTQ9UNA3 340 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 GPR52Q9Y2T5 361 aa13.55□□□□□ -0.24
SDC3-203ENST00000471567 HTR3EA5X5Y0 456 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 M0R082 166 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 UBOX5O94941 541 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 PPP3CBP16298 524 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 PSMB1P20618 241 aaKnown RBP13.54□□□□□ -0.24
SDC3-203ENST00000471567 NTF4P34130 210 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
SDC3-203ENST00000471567 FBXW9Q5XUX1 488 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 GPAT4Q86UL3 456 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 NKAIN4Q8IVV8 208 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 ZNF417Q8TAU3 575 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 LINC01560Q8TB33 94 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 ZNF587Q96SQ5 575 aaPredicted RBP13.54□□□□□ -0.24
SDC3-203ENST00000471567 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
SDC3-203ENST00000471567 KLHL4Q9C0H6 718 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 MUC13Q9H3R2 512 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 MRPL39Q9NYK5 338 aaKnown RBP13.54□□□□□ -0.24
SDC3-203ENST00000471567 ENPP4Q9Y6X5 453 aa13.54□□□□□ -0.24
SDC3-203ENST00000471567 CENPEQ02224 2701 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 ARPC2O15144 300 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 GOSR1O95249 250 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 PRF1P14222 555 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 ZNF43P17038 809 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 CCKARP32238 428 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
SDC3-203ENST00000471567 ITGADQ13349 1161 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 ZNF74Q16587 644 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 CREB3L2Q70SY1 520 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 CYP4Z1Q86W10 505 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 STEAP2Q8NFT2 490 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 TMEM239Q8WW34 195 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 PYURFQ96I23 114 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 MOGAT1Q96PD6 335 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 FNDC11Q9BVV2 318 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 FKRPQ9H9S5 495 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 ACTR3BQ9P1U1 418 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 TESMINQ9Y4I5 508 aa13.53□□□□□ -0.24
SDC3-203ENST00000471567 FREM1Q5H8C1 2179 aa13.52□□□□□ -0.24
SDC3-203ENST00000471567 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 FFAR1O14842 300 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 CH25HO95992 272 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 ADAP00813 363 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MT-ND1P03886 318 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 NQO1P15559 274 aaKnown RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 PTNP21246 168 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 CBLP22681 906 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 EDNRAP25101 427 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 YAP1P46937 504 aaKnown RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 TLE4Q04727 773 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 PMS2P3Q13401 168 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 C1DQ13901 141 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms