RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 A0A0J9YW62 118 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 MS4A18H0YCH9 400 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 M0R082 166 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PRKYO43930 277 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 F13BP05160 661 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 SLC6A6P31641 620 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 DIO1P49895 249 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 MLLT10P55197 1068 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 NUP107P57740 925 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 FOXK2Q01167 660 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 RPL18Q07020 188 aaKnown RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PMS2P3Q13401 168 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ZNF169Q14929 603 aaPredicted RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 SNAPC1Q16533 368 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 SGCBQ16585 318 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 SMN1Q16637 294 aaKnown RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 MS4A18Q3C1V0 323 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ANKDD1AQ495B1 522 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 C6orf141Q5SZD1 244 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ZNF362Q5T0B9 420 aaPredicted RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 Q6ZS92 163 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 TMPPEQ6ZT21 453 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PTCHD4Q6ZW05 846 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 NANOGNBQ7Z5D8 188 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 CCDC103Q8IW40 242 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 DEPDC4Q8N2C3 294 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 FAM109AQ8N4B1 249 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 TCEANCQ8N8B7 351 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ZNF417Q8TAU3 575 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 SMPDL3BQ92485 455 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ZNF587Q96SQ5 575 aaPredicted RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 TAPBPLQ9BX59 468 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 DEFB127Q9H1M4 99 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 ACKR4Q9NPB9 350 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 NRIP3Q9NQ35 241 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 IMPAD1Q9NX62 359 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 QPCTLQ9NXS2 382 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 MRPL39Q9NYK5 338 aaKnown RBP11.53□□□□□ -0.56
RUNX1-213ENST00000469087 TRAPPC4Q9Y296 219 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 HDGFL3Q9Y3E1 203 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PCDHGB7Q9Y5F8 929 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 IGF2RP11717 2491 aa11.53□□□□□ -0.56
RUNX1-213ENST00000469087 PTPRQQ9UMZ3 2332 aa11.52□□□□□ -0.56
RUNX1-213ENST00000469087 SULT2B1O00204 365 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 PLPP3O14495 311 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 SURF4O15260 269 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 TLX2O43763 284 aaPredicted RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 FZD7O75084 574 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 WISP2O76076 250 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 AKR7A3O95154 331 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 SLC2A10O95528 541 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ITGB2P05107 769 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ADORA3P0DMS8 318 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 RPL4P36578 427 aaKnown RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 PCYT1AP49585 367 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 CHN2P52757 468 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 SUCLG1P53597 346 aaKnown RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 CLDN15P56746 228 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 CLDN20P56880 219 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 MFSD13AQ14CX5 517 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 SLC35F1Q5T1Q4 408 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 DPY19L2P2Q6ZN68 376 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 KDM8Q8N371 416 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF786Q8N393 782 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 MIB2Q96AX9 1013 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 DTNBP1Q96EV8 351 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 POLDIP3Q9BY77 421 aaKnown RBP11.52□□□□□ -0.57
RUNX1-213ENST00000469087 SLC6A15Q9H2J7 730 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ZDHHC11Q9H8X9 412 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 CORINQ9Y5Q5 1042 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 IER3IP1Q9Y5U9 82 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 ZZEF1O43149 2961 aa11.52□□□□□ -0.57
RUNX1-213ENST00000469087 C11orf98E9PRG8 122 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 ACOT7O00154 380 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 HMGN1P05114 100 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 AHCYP23526 432 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 OR2B6P58173 313 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 CTXN1P60606 82 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 ERVK-25P63136 954 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 LINC00303Q3SY05 128 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 PLEKHN1Q494U1 663 aaPredicted RBP11.51□□□□□ -0.57
RUNX1-213ENST00000469087 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
RUNX1-213ENST00000469087 GGNQ86UU5 652 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 SLC43A2Q8N370 569 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 TMEM99Q8N816 258 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
RUNX1-213ENST00000469087 OR8J1Q8NGP2 316 aa11.51□□□□□ -0.57
RUNX1-213ENST00000469087 CRELD1Q96HD1 420 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms