RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	GP6	Q9HCN6	339 aa		8.53	□□□□□ -1.04
PSMD4-208	ENST00000462970	FAM53C	Q9NYF3	392 aa		8.53	□□□□□ -1.04
PSMD4-208	ENST00000462970	ING1	Q9UK53	422 aa	Predicted RBP	8.53	□□□□□ -1.04
PSMD4-208	ENST00000462970		A0A087WUJ7	227 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970		A6NNC1	897 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970		B2RBV5	119 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970		M0R082	166 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	CHP2	O43745	196 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	LYZL6	O75951	148 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	KRT33A	O76009	404 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	UMPS	P11172	480 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	EPX	P11678	715 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	EDNRA	P25101	427 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	CCKAR	P32238	428 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	MSX2	P35548	267 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	MNAT1	P51948	309 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	KRTAP10-9	P60411	292 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	EGR4	Q05215	589 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	PMS2P3	Q13401	168 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	PDK3	Q15120	406 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	STK11	Q15831	433 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	SAMD4B	Q5PRF9	694 aa	Known RBP	8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	FAM69A	Q5T7M9	428 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	C9orf135	Q5VTT2	229 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	C8orf82	Q6P1X6	216 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	C5orf46	Q6UWT4	87 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	C6orf89	Q6UWU4	347 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	STAC2	Q6ZMT1	411 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	AAED1	Q7RTV5	226 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	PGAM4	Q8N0Y7	254 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	KDM8	Q8N371	416 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	ZNF454	Q8N9F8	522 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	OR9K2	Q8NGE7	335 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	ZNF417	Q8TAU3	575 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	BCAS4	Q8TDM0	211 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	KISS1R	Q969F8	398 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	C14orf79	Q96F83	325 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	HSH2D	Q96JZ2	352 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	ZNF587	Q96SQ5	575 aa	Predicted RBP	8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	PTDSS2	Q9BVG9	487 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	ACTR6	Q9GZN1	396 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	PARPBP	Q9NWS1	579 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	NDE1	Q9NXR1	346 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	UPB1	Q9UBR1	384 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	SEC14L4	Q9UDX3	406 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	RIMS3	Q9UJD0	308 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	TESMIN	Q9Y4I5	508 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	FLVCR1	Q9Y5Y0	555 aa		8.52	□□□□□ -1.05
PSMD4-208	ENST00000462970	CCDC168	Q8NDH2	2452 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	IGKV3D-15	A0A087WSY6	115 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	CIB4	A0PJX0	185 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	LRRN3	E7EW58	273 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	OR2T1	O43869	369 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	NPIPB7	O75200	414 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	OR6A2	O95222	327 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	CH25H	O95992	272 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	IFNW1	P05000	195 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	CDH2	P19022	906 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	GGT1	P19440	569 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	DNAJA1	P31689	397 aa	Known RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	IFNA8	P32881	189 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	SLC16A1	P53985	500 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	SELENOW	P63302	87 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	H3F3A	P84243	136 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	FAP	Q12884	760 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	PIN1	Q13526	163 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	SLC17A1	Q14916	467 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	KRT72	Q14CN4	511 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	IFI44L	Q53G44	452 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	SWT1	Q5T5J6	900 aa	Known RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	GLYAT	Q6IB77	296 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	WDR88	Q6ZMY6	472 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	H1FNT	Q75WM6	255 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	BHLHA15	Q7RTS1	189 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	TSPYL5	Q86VY4	417 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	RBM15B	Q8NDT2	890 aa	Known RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	STEAP2	Q8NFT2	490 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	GEMIN6	Q8WXD5	167 aa	Known RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	ZDHHC16	Q969W1	377 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	S100PBP	Q96BU1	408 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	PIK3IP1	Q96FE7	263 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	LURAP1	Q96LR2	239 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	DACH2	Q96NX9	599 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	MOGAT1	Q96PD6	335 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	TMEM43	Q9BTV4	400 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	FNDC11	Q9BVV2	318 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	ZNF226	Q9NYT6	803 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	RHCG	Q9UBD6	479 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	ABCD2	Q9UBJ2	740 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	RPS6KA6	Q9UK32	745 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	RASD1	Q9Y272	281 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	ALPK2	Q86TB3	2170 aa		8.51	□□□□□ -1.05
PSMD4-208	ENST00000462970	MAP1A	P78559	2803 aa	Predicted RBP	8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	HEATR1	Q9H583	2144 aa	Known RBP	8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	FTCDNL1	E5RQL4	147 aa		8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	C11orf98	E9PRG8	122 aa		8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	CTAG2	O75638	210 aa		8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	RAD51D	O75771	328 aa		8.5	□□□□□ -1.05
PSMD4-208	ENST00000462970	VAMP5	O95183	116 aa		8.5	□□□□□ -1.05

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms