RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 POLR2J2Q9GZM3 115 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 ACTR6Q9GZN1 396 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 PCDHAC1Q9H158 963 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 POLR2J3Q9H1A7 115 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 OR10A4Q9H209 315 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 NDE1Q9NXR1 346 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 UPB1Q9UBR1 384 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 FREM1Q5H8C1 2179 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
TRAPPC12-213ENST00000461577 M0R082 166 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 OR5F1O95221 314 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 CNOT4O95628 575 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 SERPINA1P01009 418 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 IGHV3-9P01782 118 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 BGLAPP02818 100 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 NCK1P16333 377 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 CRYGSP22914 178 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 P2RY4P51582 365 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 KRTAP10-9P60411 292 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 SLC25A3Q00325 362 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 FOXD4Q12950 439 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 ITGADQ13349 1161 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 C1DQ13901 141 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 POU4F3Q15319 338 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 TSC22D1Q15714 1073 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 IFI44LQ53G44 452 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 FBXW9Q5XUX1 488 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 GLYATQ6IB77 296 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 LINC00114Q6XXX2 140 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 FKBP9P1Q75LS8 142 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 CBLL1Q75N03 491 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 BHLHA15Q7RTS1 189 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 AAED1Q7RTV5 226 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 KDM8Q8N371 416 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 FITM2Q8N6M3 262 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 RNF148Q8N7C7 305 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 MPP4Q96JB8 637 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 OXGR1Q96P68 337 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 RASSF1Q9NS23 344 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 EGFL7Q9UHF1 273 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 RIMS3Q9UJD0 308 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 RPS6KA6Q9UK32 745 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 B3GALT5Q9Y2C3 310 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 CORINQ9Y5Q5 1042 aa9.37□□□□□ -0.91
TRAPPC12-213ENST00000461577 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 CIB4A0PJX0 185 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 KPNA4O00629 521 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 AKAP8O43823 692 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 LYZL6O75951 148 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 KRT33AO76009 404 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 OR6A2O95222 327 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 LYPD3O95274 346 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 THY1P04216 161 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 IFNW1P05000 195 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 ZNF43P17038 809 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 GGT1P19440 569 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 TCN1P20061 433 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 EDNRAP25101 427 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 NTF4P34130 210 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 LTBQ06643 244 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 FAPQ12884 760 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 PMS2P3Q13401 168 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 PIN1Q13526 163 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 SAMD4BQ5PRF9 694 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 ALKBH2Q6NS38 261 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 NIPAL3Q6P499 406 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 WDR88Q6ZMY6 472 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 CREB3L2Q70SY1 520 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 VTCN1Q7Z7D3 282 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 TSPYL5Q86VY4 417 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 WFDC8Q8IUA0 241 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 DEFB107AQ8IZN7 70 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 BCAS4Q8TDM0 211 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 GEMIN6Q8WXD5 167 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 S100PBPQ96BU1 408 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 PIK3IP1Q96FE7 263 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 ZNF385AQ96PM9 386 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 CDRT15Q96T59 188 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 ASB6Q9NWX5 421 aa9.36□□□□□ -0.91
TRAPPC12-213ENST00000461577 FAM221AA4D161 298 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 B2RBV5 119 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 LRRN3E7EW58 273 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 FZD7O75084 574 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 CH25HO95992 272 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 HIST1H2ABP04908 130 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 THRBP10828 461 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 UMPSP11172 480 aa9.35□□□□□ -0.91
TRAPPC12-213ENST00000461577 HSD17B1P14061 328 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms