RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SAMD12Q8N8I0 201 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 CLRN3Q8NCR9 226 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 OR2T35Q8NGX2 323 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 MSLNLQ96KJ4 702 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 HSPA12BQ96MM6 686 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ADOQ96SZ5 270 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 TMEM43Q9BTV4 400 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 TAPBPLQ9BX59 468 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 EMC7Q9NPA0 242 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 B3GAT2Q9NPZ5 323 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 TRIM36Q9NQ86 728 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ARID1AO14497 2285 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 HK1P19367 917 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 EMDP50402 254 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 S100A12P80511 92 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 BIKQ13323 160 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 PLK5Q496M5 336 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 C3orf38Q5JPI3 329 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 OTPQ5XKR4 325 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 CLDN22Q8N7P3 220 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ATOH1Q92858 354 aaPredicted RBP14.18□□□□□ -0.14
LMNB1-203ENST00000460265 C4orf36Q96KX1 117 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ARHGDIGQ99819 225 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 OR51J1Q9H342 316 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ACAD8Q9UKU7 415 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 EDARQ9UNE0 448 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 ADAM18Q9Y3Q7 739 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 DSPPQ9NZW4 1301 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 C17orf105B2RV13 164 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 TMEM150CB9EJG8 249 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 GABRPO00591 440 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 SURF4O15260 269 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 HIST1H2ABP04908 130 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 PSMB10P40306 273 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 GRK6P43250 576 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 ERVK-25P63136 954 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 DUSP8Q13202 625 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 FZD2Q14332 565 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 TFAP2EQ6VUC0 442 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 HIST3H2AQ7L7L0 130 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 RCBTB1Q8NDN9 531 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 HIST1H2ACQ93077 130 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 HCAR1Q9BXC0 346 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 FOXQ1Q9C009 403 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.17□□□□□ -0.14
LMNB1-203ENST00000460265 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 C11orf98E9PRG8 122 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 HTR2AP28223 471 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 CAPZA2P47755 286 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 OR12D2P58182 307 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 SIRT6Q8N6T7 355 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 OR4C3Q8NH37 302 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 NR4A3Q92570 626 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 FOXN4Q96NZ1 517 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 CHIAQ9BZP6 476 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 NKIRAS2Q9NYR9 191 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 C2orf16Q68DN1 1984 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 TCRBV16S1A1N1A0A5B0 115 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 CPED1A4D0V7 1026 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 PDCD5O14737 125 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 CD38P28907 300 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 TSPAN5P62079 268 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 PON3Q15166 354 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 OR5M10Q6IEU7 315 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF436Q9C0F3 470 aaPredicted RBP14.17□□□□□ -0.14
LMNB1-203ENST00000460265 EXTL2Q9UBQ6 330 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 CHST2Q9Y4C5 530 aa14.17□□□□□ -0.14
LMNB1-203ENST00000460265 RP1L1Q8IWN7 2480 aaPredicted RBP14.16□□□□□ -0.14
LMNB1-203ENST00000460265 PTPRSQ13332 1948 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 CDHR4A6H8M9 788 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 CHURC1-FNTBB4DL54 471 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 HCRTR2O43614 444 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 RGS11O94810 467 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 MT-ND5P03915 603 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SHC1P29353 583 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SLC6A6P31641 620 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 RAB38P57729 211 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 GPR176Q14439 515 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 MEPCEQ7L2J0 689 aaKnown RBP14.16□□□□□ -0.14
LMNB1-203ENST00000460265 STPG2Q8N412 459 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 OR51Q1Q8NH59 317 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 NT5CQ8TCD5 201 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 KATNB1Q9BVA0 655 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SEMA6CQ9H3T2 930 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 DUSP22Q9NRW4 184 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 EMC3Q9P0I2 261 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 HS3ST3A1Q9Y663 406 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 TEX13CA0A0J9YWL9 993 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 LCN1P31025 176 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 AGFG1P52594 562 aaKnown RBP14.16□□□□□ -0.14
LMNB1-203ENST00000460265 FBXW4P57775 412 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF628Q5EBL2 1059 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 WDR88Q6ZMY6 472 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 GKN2Q86XP6 184 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 GID4Q8IVV7 300 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 GAL3ST1Q99999 423 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 LRRC61Q9BV99 259 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF106Q9H2Y7 1883 aaKnown RBP14.16□□□□□ -0.14
LMNB1-203ENST00000460265 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms