RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NGBQ9NPG2 151 aa14.31□□□□□ -0.12
CD28-203ENST00000458610 ASB6Q9NWX5 421 aa14.31□□□□□ -0.12
CD28-203ENST00000458610 UPB1Q9UBR1 384 aa14.31□□□□□ -0.12
CD28-203ENST00000458610 RPS6KA6Q9UK32 745 aa14.31□□□□□ -0.12
CD28-203ENST00000458610 IGKV1D-42A0A075B6H8 117 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 LOC102725191A0A1B0GVB3 256 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 RAMP1O60894 148 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
CD28-203ENST00000458610 OR5F1O95221 314 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 ZNF43P17038 809 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 CRYGSP22914 178 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 C1DQ13901 141 aaKnown RBP14.3□□□□□ -0.12
CD28-203ENST00000458610 NPTX1Q15818 432 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 SPATS1Q496A3 300 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 ANKRD34AQ69YU3 496 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 DEF8Q6ZN54 512 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 FKBP9P1Q75LS8 142 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 BHLHA15Q7RTS1 189 aaPredicted RBP14.3□□□□□ -0.12
CD28-203ENST00000458610 P2RY8Q86VZ1 359 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 RBM45Q8IUH3 476 aaKnown RBP14.3□□□□□ -0.12
CD28-203ENST00000458610 PGAM4Q8N0Y7 254 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 SCAIQ8N9R8 606 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 POMGNT2Q8NAT1 580 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 ADPRHL1Q8NDY3 354 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 OR4D11Q8NGI4 311 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 SLC41A3Q96GZ6 507 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 NSL1Q96IY1 281 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 HS6ST2Q96MM7 605 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 PRSS50Q9UI38 385 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 SLC7A7Q9UM01 511 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 NOTCH2Q04721 2471 aa14.3□□□□□ -0.12
CD28-203ENST00000458610 HTR3EA5X5Y0 456 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 AKAP8O43823 692 aaKnown RBP14.29□□□□□ -0.12
CD28-203ENST00000458610 FZD7O75084 574 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 KRT33AO76009 404 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 ZNF682O95780 498 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 HIST1H2ABP04908 130 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 IFNW1P05000 195 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 NQO1P15559 274 aaKnown RBP14.29□□□□□ -0.12
CD28-203ENST00000458610 GRPRP30550 384 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 RBM34P42696 430 aaKnown RBP14.29□□□□□ -0.12
CD28-203ENST00000458610 TGFBR3Q03167 851 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 PMS2P3Q13401 168 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 SAMD4BQ5PRF9 694 aaKnown RBP14.29□□□□□ -0.12
CD28-203ENST00000458610 C1QTNF12Q5T7M4 302 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 GLYATQ6IB77 296 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 OR7E24Q6IFN5 339 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 CREB3L2Q70SY1 520 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 CBLL1Q75N03 491 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 HIST3H2AQ7L7L0 130 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 HIST1H2ACQ93077 130 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 MUCL1Q96DR8 90 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 ZC3HAV1LQ96H79 300 aaKnown RBP14.29□□□□□ -0.12
CD28-203ENST00000458610 ARL8BQ9NVJ2 186 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 RIMS3Q9UJD0 308 aa14.29□□□□□ -0.12
CD28-203ENST00000458610 CIB4A0PJX0 185 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 M0R082 166 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 OR6A2O95222 327 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 GGT1P19440 569 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 CCKARP32238 428 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 OR1E2P47887 323 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 P2RY4P51582 365 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 KRTAP10-9P60411 292 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 IL1RL1Q01638 556 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 ST3GAL3Q11203 375 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 BEX5Q5H9J7 111 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 CDC20BQ86Y33 519 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 P3H2Q8IVL5 708 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 ANKHD1Q8IWZ3 2542 aaKnown RBP14.28□□□□□ -0.12
CD28-203ENST00000458610 ZNF417Q8TAU3 575 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 GEMIN6Q8WXD5 167 aaKnown RBP14.28□□□□□ -0.12
CD28-203ENST00000458610 S100PBPQ96BU1 408 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 ZNF587Q96SQ5 575 aaPredicted RBP14.28□□□□□ -0.12
CD28-203ENST00000458610 SLCO5A1Q9H2Y9 848 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 MRPL39Q9NYK5 338 aaKnown RBP14.28□□□□□ -0.12
CD28-203ENST00000458610 TAS2R16Q9NYV7 291 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 MALT1Q9UDY8 824 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 RCE1Q9Y256 329 aa14.28□□□□□ -0.12
CD28-203ENST00000458610 SERPINA1P01009 418 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 BGLAPP02818 100 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 HRGP04196 525 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 HSD17B1P14061 328 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 IGHV1-2P23083 117 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 NR1H2P55055 460 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 FAPQ12884 760 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 CYP4Z1Q86W10 505 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 WFDC8Q8IUA0 241 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 UEVLDQ8IX04 471 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 FITM2Q8N6M3 262 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 ZIC4Q8N9L1 334 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 ZNF385AQ96PM9 386 aaKnown RBP14.27□□□□□ -0.13
CD28-203ENST00000458610 CDRT15Q96T59 188 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 FKRPQ9H9S5 495 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 MAGEL2Q9UJ55 1249 aa14.27□□□□□ -0.13
CD28-203ENST00000458610 SAMD4AQ9UPU9 718 aaKnown RBP14.27□□□□□ -0.13
CD28-203ENST00000458610 B2RBV5 119 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 LYZL6O75951 148 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 LYPD3O95274 346 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms