RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 LYRM4Q9HD34 91 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
SHC1-210ENST00000448116 PPIEQ9UNP9 301 aaKnown RBP11.84□□□□□ -0.51
SHC1-210ENST00000448116 TRAV1-2A0A0B4J238 106 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 SLC51BQ86UW2 128 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 SLC2A12Q8TD20 617 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 BMFQ96LC9 184 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 LRIT1Q9P2V4 623 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
SHC1-210ENST00000448116 TP53BP1Q12888 1972 aaPredicted RBP11.84□□□□□ -0.51
SHC1-210ENST00000448116 A0A0A6YYC8 382 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 I3L1I5 382 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 OGG1O15527 345 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 GALR3O60755 368 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 AK1P00568 194 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 CSTAP01040 98 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 GPR137Q96N19 417 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 C20orf85Q9H1P6 137 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 HAO2Q9NYQ3 351 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 COPZ2Q9P299 210 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 OR6C68A6NDL8 312 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 SELENOPP49908 381 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 RPS11P62280 158 aaKnown RBP eCLIP11.83□□□□□ -0.52
SHC1-210ENST00000448116 ILF3Q12906 894 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■□□□□ 8.4
SHC1-210ENST00000448116 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 SLC22A10Q63ZE4 541 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 ULK3Q6PHR2 472 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ZNF782Q6ZMW2 699 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 FTMTQ8N4E7 242 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 OR56B4Q8NH76 319 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 SEC22CQ9BRL7 303 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 FBXL21Q9UKT6 434 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 NKX2-2O95096 273 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 HRGP04196 525 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 UCHL1P09936 223 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TSPAN7P41732 249 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 HSF2Q03933 536 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 C1orf61Q13536 156 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 CAMK2DQ13557 499 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ENPP2Q13822 863 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TMEM255AQ5JRV8 349 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 UXS1Q8NBZ7 420 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 RIT1Q92963 219 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 TRAF4Q9BUZ4 470 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 TCEAL2Q9H3H9 227 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 FKRPQ9H9S5 495 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 C2orf42Q9NWW7 574 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 OBP2AQ9NY56 170 aa11.83□□□□□ -0.52
SHC1-210ENST00000448116 ELF5Q9UKW6 265 aaPredicted RBP11.83□□□□□ -0.52
SHC1-210ENST00000448116 USP34Q70CQ2 3546 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 MUC22E2RYF6 1773 aaPredicted RBP11.82□□□□□ -0.52
SHC1-210ENST00000448116 C2orf74A8MZ97 194 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 PIN1P1O15428 100 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 SPI1P17947 270 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 MAT1AQ00266 395 aaKnown RBP11.82□□□□□ -0.52
SHC1-210ENST00000448116 SNTA1Q13424 505 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 FHL1Q13642 323 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 KLF9Q13886 244 aaPredicted RBP11.82□□□□□ -0.52
SHC1-210ENST00000448116 LEG1Q6P5S2 330 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 ZCCHC12Q6PEW1 402 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 APOOLQ6UXV4 268 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 Q6ZTK2 550 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 TEX19Q8NA77 164 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 RCBTB1Q8NDN9 531 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 OR4C3Q8NH37 302 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 SMIM4Q8WVI0 70 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 Q96M85 177 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 DLL4Q9NR61 685 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 GLTPQ9NZD2 209 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 EDARQ9UNE0 448 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 TNFSF14O43557 240 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 IFNA16P05015 189 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 TPOP07202 933 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 RPS27P42677 84 aaKnown RBP11.82□□□□□ -0.52
SHC1-210ENST00000448116 DIO1P49895 249 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 CCR9P51686 369 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 BLVRAP53004 296 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 TSPAN5P62079 268 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 ALG11Q2TAA5 492 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
SHC1-210ENST00000448116 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms