RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-210ENST00000442216 SETXQ7Z333 2677 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 LOC102725191A0A1B0GVB3 256 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 MRPL33O75394 65 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 BGLAPP02818 100 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 IFNW1P05000 195 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 PPP3CBP16298 524 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 NCK1P16333 377 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 TNFRSF1BP20333 461 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 ST3GAL3Q11203 375 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 DAZAP2Q15038 168 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 P2RY6Q15077 328 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 WDR88Q6ZMY6 472 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 Q6ZT83 130 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 FKBP9P1Q75LS8 142 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 H1FNTQ75WM6 255 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 RNF148Q8N7C7 305 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 OR9K2Q8NGE7 335 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 APH1AQ96BI3 265 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 HSH2DQ96JZ2 352 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 OXGR1Q96P68 337 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 PRSS27Q9BQR3 290 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 AMBRA1Q9C0C7 1298 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
CSNK1E-210ENST00000442216 SH3D21A4FU49 640 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 GRPRP30550 384 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 CCKARP32238 428 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 PIN1Q13526 163 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 SNTB1Q13884 538 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 EXOC3L2Q2M3D2 409 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF775Q96BV0 537 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 ASPNQ9BXN1 380 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 MUC13Q9H3R2 512 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 MCCC2Q9HCC0 563 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 MRPL39Q9NYK5 338 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 C6orf203Q9P0P8 240 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 PRPF19Q9UMS4 504 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 TESMINQ9Y4I5 508 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 SNX13Q9Y5W8 968 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 UNC79Q9P2D8 2635 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 CRYBG3Q68DQ2 2970 aa13.32□□□□□ -0.28
CSNK1E-210ENST00000442216 FAM221AA4D161 298 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 M0R082 166 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 PRF1P14222 555 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 NTF4P34130 210 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 TLE4Q04727 773 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 LTBQ06643 244 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 ITGADQ13349 1161 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 SFRP5Q5T4F7 317 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 RINLQ6ZS11 566 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 CREB3L2Q70SY1 520 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 OFCC1Q8IZS5 231 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 FAM156AQ8NDB6 213 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 STEAP2Q8NFT2 490 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 NSMCE2Q96MF7 247 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF587Q96SQ5 575 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 FKRPQ9H9S5 495 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 MALT1Q9UDY8 824 aa13.31□□□□□ -0.28
CSNK1E-210ENST00000442216 OR6C65A6NJZ3 312 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 CASKO14936 926 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ARPC2O15144 300 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ADAP00813 363 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 MT-ND1P03886 318 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF43P17038 809 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 COX5AP20674 150 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF74Q16587 644 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 SSX8Q7RTT4 187 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 CYP4Z1Q86W10 505 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 CXorf67Q86X51 503 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 OR5J2Q8NH18 312 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 TMEM239Q8WW34 195 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 POP5Q969H6 163 aaKnown RBP13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 WFIKKN1Q96NZ8 548 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ANKRD19PQ9H560 264 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 MEPEQ9NQ76 525 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 NANSQ9NR45 359 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF226Q9NYT6 803 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms