RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 TIPARPQ7Z3E1 657 aaKnown RBP13.64□□□□□ -0.23
PCNX1-202ENST00000439984 SLC35F3Q8IY50 421 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 PITX2Q99697 317 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 OR5H14A6NHG9 310 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 NSA2O95478 260 aaKnown RBP13.64□□□□□ -0.23
PCNX1-202ENST00000439984 IFITM3Q01628 133 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 SLC14A2Q15849 920 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 LHFPL5Q8TAF8 219 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 HERVK_113Q902F9 699 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 GABARAPL3Q9BY60 117 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCNX1-202ENST00000439984 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
PCNX1-202ENST00000439984 LILRB5O75023 590 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PMP2P02689 132 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 IFNGR1P15260 489 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 GABRR1P24046 479 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SDHAP31040 664 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 MANEALQ5VSG8 457 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 WDR89Q96FK6 387 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PLEKHJ1Q9NW61 149 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 ASB6Q9NWX5 421 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 A0A087WV62 115 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 ANTXRLA6NF34 631 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SLC22A6Q4U2R8 563 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 ELOVL2Q9NXB9 296 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 YIPF1Q9Y548 306 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 HTR1FP30939 366 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 Q3ZCU0 254 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PLA2G15Q8NCC3 412 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 MTMR11A4FU01 709 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 NECAP1Q8NC96 275 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 UPRTQ96BW1 309 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 MRPL38Q96DV4 380 aaKnown RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 BTBD17A6NE02 478 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 H3BQ06 376 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 GNB3P16520 340 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 NKG7Q16617 165 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 APCDD1Q8J025 514 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 C1orf87Q8N0U7 546 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 FBXL6Q8N531 539 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 OR13C5Q8NGS8 318 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 C2orf15Q8WU43 125 aaKnown RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SPATA6Q9NWH7 488 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 KLRF1Q9NZS2 232 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 OR2F2O95006 317 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 QDPRP09417 244 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 ATXN1LP0C7T5 689 aaKnown RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PIPP12273 146 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 FABP4P15090 132 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SRMP19623 302 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 CR2P20023 1033 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 CCR7P32248 378 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 SOX9P48436 509 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 OR2F1Q13607 317 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
PCNX1-202ENST00000439984 TRAM1L1Q8N609 369 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
PCNX1-202ENST00000439984 UGDHO60701 494 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 SBK3P0C264 359 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 MMP11P24347 488 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 UBAC2Q8NBM4 344 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 AKR1E2Q96JD6 320 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 SGCZQ96LD1 299 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 FBXL12Q9NXK8 326 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 CDK3Q00526 305 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 LMAN2Q12907 356 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 XKR7Q5GH72 579 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 BAGE3Q86Y29 109 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 BAGE2Q86Y30 109 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 ZNF439Q8NDP4 499 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 LKAAEAR1Q8TD35 194 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 MIB2Q96AX9 1013 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
PCNX1-202ENST00000439984 ISYNA1Q9NPH2 558 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 ACER3Q9NUN7 267 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 ARID1BQ8NFD5 2236 aaPredicted RBP13.62□□□□□ -0.23
PCNX1-202ENST00000439984 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 SFRP5Q5T4F7 317 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 SENP5Q96HI0 755 aaPredicted RBP13.62□□□□□ -0.23
PCNX1-202ENST00000439984 G6PC3Q9BUM1 346 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 MIOXQ9UGB7 285 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 COL4A1P02462 1669 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 PAPLNO95428 1278 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 TMEM106AQ96A25 262 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 CPNE7Q9UBL6 633 aa13.62□□□□□ -0.23
PCNX1-202ENST00000439984 SIGLEC6O43699 453 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms