RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZNF346Q9UL40 294 aaKnown RBP9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 TMEM5Q9Y2B1 443 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 PCDHGA9Q9Y5G4 932 aaKnown RBP9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 SPACA6W5XKT8 324 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 EML5Q05BV3 1969 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 A0A0J9YY10 115 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 IDSB3KWA1 339 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 SLC43A1O75387 559 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 CD3GP09693 182 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 HK1P19367 917 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 RRAS2P62070 204 aaPredicted RBP9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 BTG2P78543 158 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 HSD17B12Q53GQ0 312 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 PLA1AQ53H76 456 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 RTL4Q6ZR62 310 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 RFT1Q96AA3 541 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 LMF1Q96S06 567 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 PDCD1LG2Q9BQ51 273 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 CCDC3Q9BQI4 270 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 BEX1Q9HBH7 125 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 LRIT1Q9P2V4 623 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 CHRNA9Q9UGM1 479 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 IER3IP1Q9Y5U9 82 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 LRP4O75096 1905 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 TNFRSF10CO14798 259 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 FOXS1O43638 330 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 FZD7O75084 574 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 NPR2P20594 1047 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 PITPNBP48739 271 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 GBX2P52951 348 aaPredicted RBP9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 FCN2Q15485 313 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 RPL13AP3Q6NVV1 102 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 ZCCHC12Q6PEW1 402 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 TMPRSS9Q7Z410 1059 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 OR4C3Q8NH37 302 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 SEC16AO15027 2179 aa9.55□□□□□ -0.88
CLSTN1-203ENST00000435891 A0A0A6YYJ9 748 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 LINC00862A6NCI5 91 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 CHURC1-FNTBB4DL54 471 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 SLC35E2P0CK97 266 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 PSMB10P40306 273 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 RPS11P62280 158 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 TNK1Q13470 666 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 SLC36A2Q495M3 483 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 BCL2L15Q5TBC7 163 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GPALPP1Q8IXQ4 340 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 ARHGEF39Q8N4T4 335 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 METTL27Q8N6F8 245 aaPredicted RBP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 FAM98AQ8NCA5 519 aaKnown RBP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 NMNAT3Q96T66 252 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GHITMQ9H3K2 345 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 MAB21L2Q9Y586 359 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 TP53BP1Q12888 1972 aaPredicted RBP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 TCRBV21S2A2A0A5A6 115 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 FAM171A2A8MVW0 826 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 H7C2Y5 167 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 SELENOFO60613 162 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 SYPP08247 313 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 ADRB1P08588 477 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 RAB38P57729 211 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 IZUMO1Q8IYV9 350 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 COQ8AQ8NI60 647 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GPBAR1Q8TDU6 330 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 VSTM2LQ96N03 204 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 OR14A2Q96R54 314 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 S1PR5Q9H228 398 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 INPP5EQ9NRR6 644 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 AK6Q9Y3D8 172 aaKnown RBP9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 CLDN16Q9Y5I7 305 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 PEX14O75381 377 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 SOX30O94993 753 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GABRG2P18507 467 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 RAB3AP20336 220 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 AHCYP23526 432 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GRPRP30550 384 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 DGCR2P98153 550 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 CORO6Q6QEF8 472 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 PRSS45Q7RTY3 260 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 HMGB4Q8WW32 186 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 ZFP3Q96NJ6 502 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 GPR174Q9BXC1 333 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 NUDT15Q9NV35 164 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 HAO2Q9NYQ3 351 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 PIAS3Q9Y6X2 628 aa9.54□□□□□ -0.88
CLSTN1-203ENST00000435891 A0A1W2PPL8 197 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 OR5K4A6NMS3 321 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 PRR32B1ATL7 298 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 AK1P00568 194 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 RAF1P04049 648 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 IGHV4-34P06331 123 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 CT45A8P0DMV1 189 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 CT45A9P0DMV2 189 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 RAB3BP20337 219 aa9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 RBMS1P29558 406 aaKnown RBP9.53□□□□□ -0.88
CLSTN1-203ENST00000435891 SLC6A6P31641 620 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms