RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ABHD17CQ6PCB6 329 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 SPRED1Q7Z699 444 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 OR5H2Q8NGV7 314 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 SFXN5Q8TD22 340 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 TLCD1Q96CP7 247 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
UBE3B-203ENST00000434735 MKS1Q9NXB0 559 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
UBE3B-203ENST00000434735 TNRC6CQ9HCJ0 1690 aaKnown RBP11.23□□□□□ -0.61
UBE3B-203ENST00000434735 CD82P27701 267 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ATP4BP51164 291 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 UGT8Q16880 541 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RNASE10Q5GAN6 216 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF684Q5T5D7 378 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RELL1Q8IUW5 271 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 KDM8Q8N371 416 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZBTB8BQ8NAP8 495 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 OR4K15Q8NH41 348 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF649Q9BS31 505 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 POMT2Q9UKY4 750 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 PRAMEF27A3QJZ7 478 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 CRHBPP24387 322 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF83P51522 516 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 SYPL1Q16563 259 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ACER2Q5QJU3 275 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 OR8J3Q8NGG0 315 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ROBO4Q8WZ75 1007 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 PSMF1Q92530 271 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ITFG2Q969R8 447 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 INTS14Q96SY0 518 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RLIMQ9NVW2 624 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 PTTG2Q9NZH5 202 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TMEM9Q9P0T7 183 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TEX51A0A1B0GUA7 166 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 NUDT19A8MXV4 375 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 MPIG6BO95866 241 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 SERPINA5P05154 406 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 UCHL1P09936 223 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 IL3RAP26951 378 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ADH6P28332 368 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TRNP1Q6NT89 227 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TPRA1Q86W33 373 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 MORN4Q8NDC4 146 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 OR4N2Q8NGD1 307 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 MS4A8Q9BY19 250 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 HSD3B7Q9H2F3 369 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 A6NJ64 397 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RNASET2O00584 256 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 CNIH1O95406 144 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ISXQ2M1V0 245 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 COMTD1Q86VU5 262 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TSPEARQ8WU66 669 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 LMF1Q96S06 567 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 SEMA4CQ9C0C4 833 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 EIF5A2Q9GZV4 153 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 QRSL1Q9H0R6 528 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ZFP57Q9NU63 452 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TRAV6A0A075B6T7 132 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 KRBA1A5PL33 1030 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 SDHDO14521 159 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ETV5P41161 510 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 TMEM205Q6UW68 189 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 PIWIL3Q7Z3Z3 882 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 ACBD7Q8N6N7 88 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 OR8J1Q8NGP2 316 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RANBP3Q9H6Z4 567 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-203ENST00000434735 RHBDD3Q9Y3P4 386 aa11.22□□□□□ -0.61
UBE3B-203ENST00000434735 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 CENPBD1B2RD01 187 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 SERPINE2P07093 398 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 FGF3P11487 239 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-203ENST00000434735 CD97P48960 835 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 FXNQ16595 210 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF404Q494X3 552 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 METTL4Q8N3J2 472 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 IQCF1Q8N6M8 205 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
UBE3B-203ENST00000434735 SLC41A2Q96JW4 573 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ADAM29Q9UKF5 820 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 MEGF11A6BM72 1044 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 LRRTM2O43300 516 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 RP2O75695 350 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 PIPP12273 146 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ERP29P30040 261 aaKnown RBP11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ZBED5Q49AG3 693 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 PWWP2BQ6NUJ5 590 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF367Q7RTV3 350 aa11.21□□□□□ -0.61
UBE3B-203ENST00000434735 ERMP1Q7Z2K6 904 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms