RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TRAPPC4Q9Y296 219 aa5.12□□□□□ -1.59
HMGB3P24-201ENST00000433260 NOSIPQ9Y314 301 aaKnown RBP5.12□□□□□ -1.59
HMGB3P24-201ENST00000433260 HDGFL3Q9Y3E1 203 aa5.12□□□□□ -1.59
HMGB3P24-201ENST00000433260 HELZ2Q9BYK8 2649 aaKnown RBP5.12□□□□□ -1.59
HMGB3P24-201ENST00000433260 A0A087WUJ7 227 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 A0A0B4J2E0 115 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LOC100289279A0A1B0GTE1 492 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 A0A1B0GX12 115 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SH3D21A4FU49 640 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ZNF716A6NP11 495 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ZNF724A8MTY0 619 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 B2RBV5 119 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LRRN3E7EW58 273 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 KPNA4O00629 521 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TPD52L2O43399 206 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 EIF1BO60739 113 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 MRPL33O75394 65 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 DCTN3O75935 186 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 AHSA1O95433 338 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ZNF682O95780 498 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SERPINA1P01009 418 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 IFNA14P01570 189 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 THY1P04216 161 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 CDH2P19022 906 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 GTF2E2P29084 291 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SSTR2P30874 369 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 UGT2B10P36537 528 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 GSK3BP49841 420 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 MAP2K6P52564 334 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FOXG1P55316 489 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TAS2R41P59536 307 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SELENOWP63302 87 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 H3F3AP84243 136 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LTBQ06643 244 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FAPQ12884 760 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 PIN1Q13526 163 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 VEZF1Q14119 521 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 GUSBP1Q15486 140 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 NRF1Q16656 503 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SFRP5Q5T4F7 317 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 GLYATQ6IB77 296 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FDX2Q6P4F2 183 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TTC33Q6PID6 262 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 STAC2Q6ZMT1 411 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FKBP9P1Q75LS8 142 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 CCDC80Q76M96 950 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 AAED1Q7RTV5 226 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 GALNT5Q7Z7M9 940 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 CARM1Q86X55 608 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LSMEM1Q8N8F7 131 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ACBD4Q8NC06 268 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 CCDC197Q8NCU1 140 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 PIGXQ8TBF5 258 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ADAMTS16Q8TE57 1224 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 UBASH3BQ8TF42 649 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FAM222BQ8WU58 562 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 DNAJA4Q8WW22 397 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 RASSF5Q8WWW0 418 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SLC38A4Q969I6 547 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SLC35B4Q969S0 331 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 FAM162AQ96A26 154 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 APH1AQ96BI3 265 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 C14orf79Q96F83 325 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 PIK3IP1Q96FE7 263 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 NSL1Q96IY1 281 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LURAP1Q96LR2 239 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 MOGAT1Q96PD6 335 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 ZNF385AQ96PM9 386 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 KCTD14Q9BQ13 255 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 MED18Q9BUE0 208 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 LIME1Q9H400 295 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 BCO1Q9HAY6 547 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 MCCC2Q9HCC0 563 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 RHCGQ9UBD6 479 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 UPB1Q9UBR1 384 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TESQ9UGI8 421 aaKnown RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 TAGLN3Q9UI15 199 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 BAG5Q9UL15 447 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 SNX13Q9Y5W8 968 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 RELNP78509 3460 aa5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 RP1L1Q8IWN7 2480 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P24-201ENST00000433260 IGKV1D-42A0A075B6H8 117 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 TRAV36DV7A0A075B6V5 113 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 A0A1W2PR80 420 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 CIB4A0PJX0 185 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 TRAPPC13A5PLN9 417 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 MEGF11A6BM72 1044 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 AQP7P3A6NL99 342 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 A6NNC1 897 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 FTCDNL1E5RQL4 147 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 MS4A18H0YCH9 400 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 J3KTA2 159 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 GPR171O14626 319 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 OR2T1O43869 369 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 NPIPB7O75200 414 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 GMNNO75496 209 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 CTAG2O75638 210 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 RAD51DO75771 328 aa5.1□□□□□ -1.59
HMGB3P24-201ENST00000433260 SERPINI2O75830 405 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms