RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 C22orf42Q6IC83 251 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 ARSKQ6UWY0 536 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 LYPD8Q6UX82 237 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 ZNF517Q6ZMY9 492 aaPredicted RBP15.12■□□□□ 0.01
USHBP1-203ENST00000431146 NAXDQ8IW45 347 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 LRRC75AQ8NAA5 344 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 LIPHQ8WWY8 451 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 BORCS5Q969J3 196 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 C1GALT1C1Q96EU7 318 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 LRFN5Q96NI6 719 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 RASL10BQ96S79 203 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 AKIP1Q9NQ31 210 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 ZNF346Q9UL40 294 aaKnown RBP15.12■□□□□ 0.01
USHBP1-203ENST00000431146 SSR3Q9UNL2 185 aa15.12■□□□□ 0.01
USHBP1-203ENST00000431146 SF3B6Q9Y3B4 125 aaKnown RBP15.12■□□□□ 0.01
USHBP1-203ENST00000431146 SHISA8B8ZZ34 492 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 C11orf98E9PRG8 122 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 H7C1C5 153 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 IGF2P01344 180 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 BGLAPP02818 100 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 COX6A1P12074 109 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 BMP4P12644 408 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TCEA1P23193 301 aaKnown RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 RPS19P39019 145 aaKnown RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 NAA10P41227 235 aaPredicted RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 LCN6P62502 163 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 PSPHP78330 225 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 MXD1Q05195 221 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TPBGQ13641 420 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 INSL4Q14641 139 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 DCAF12Q5T6F0 453 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 LEG1Q6P5S2 330 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 SSX6Q7RTT6 188 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 OR52N1Q8NH53 320 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 ELP5Q8TE02 316 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TSSK2Q96PF2 358 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 DCLRE1CQ96SD1 692 aaKnown RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 PTDSS2Q9BVG9 487 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TMED9Q9BVK6 235 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TXNL4BQ9NX01 149 aaKnown RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 PISDQ9UG56 409 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 KNTC1P50748 2209 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TRAV36DV7A0A075B6V5 113 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 LOC102723996A0A087X1L8 192 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 B4E171 279 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 CLDN25C9JDP6 229 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 ARPC3O15145 178 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 HIST1H2ABP04908 130 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TSPAN7P41732 249 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TGM4P49221 684 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 C17orf67Q0P5P2 114 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 HIST3H2AQ7L7L0 130 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 FAM122BQ7Z309 247 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 GRINAQ7Z429 371 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 OR2Y1Q8NGV0 311 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 OR6K6Q8NGW6 343 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 HIST1H2ACQ93077 130 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 GPX7Q96SL4 187 aaPredicted RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 DDOQ99489 341 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 JAM3Q9BX67 310 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 TPK1Q9H3S4 243 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 RPRD1BQ9NQG5 326 aaKnown RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 AKAP7Q9P0M2 348 aaPredicted RBP15.11■□□□□ 0.01
USHBP1-203ENST00000431146 MED12Q93074 2177 aa15.11■□□□□ 0.01
USHBP1-203ENST00000431146 A0A1W2PQL4 384 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SMIM30A4D0T7 59 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 MAGEB4O15481 346 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 CD14P08571 375 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SPI1P17947 270 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 INSM1Q01101 510 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 FABP5Q01469 135 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ZNF85Q03923 595 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 GALEQ14376 348 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 CRTC2Q53ET0 693 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ARMC4Q5T2S8 1044 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 RAB11FIP2Q7L804 512 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SNX29P2Q8IUI4 249 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 MISPQ8IVT2 679 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SYT14Q8NB59 555 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 KCNS3Q9BQ31 491 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 METTL7AQ9H8H3 244 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 FKRPQ9H9S5 495 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ISYNA1Q9NPH2 558 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SNTG1Q9NSN8 517 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 CCDC59Q9P031 241 aaKnown RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ZNF229Q9UJW7 825 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 CAB39Q9Y376 341 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SIRT4Q9Y6E7 314 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ANKUB1A6NFN9 424 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 AKAP8O43823 692 aaKnown RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 ITGA10O75578 1167 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 PLGP00747 810 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-203ENST00000431146 TFP02787 698 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 PRKCAP17252 672 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 PYCR1P32322 319 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 PTGDSP41222 190 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 SDK2Q58EX2 2172 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 VASNQ6EMK4 673 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 TMPRSS11AQ6ZMR5 421 aa15.1■□□□□ 0.01
USHBP1-203ENST00000431146 NUP54Q7Z3B4 507 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms