RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 SLC7A13Q8TCU3 470 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ASB5Q8WWX0 329 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 LIPHQ8WWY8 451 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SLCO4A1Q96BD0 722 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SDCCAG3Q96C92 435 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GMPPAQ96IJ6 420 aaPredicted RBP11.06□□□□□ -0.64
USP40-205ENST00000430158 PSMG3-AS1Q96PY0 264 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 PIP5K1AQ99755 562 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ANKRD19PQ9H560 264 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GP6Q9HCN6 339 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GLRX2Q9NS18 164 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SEC14L4Q9UDX3 406 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ASH1LQ9NR48 2969 aaKnown RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 A0A087WUU8 490 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 ZNF724A8MTY0 619 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 MS4A18H0YCH9 400 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 OR2T1O43869 369 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 EIF1BO60739 113 aaKnown RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 AKR7A3O95154 331 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 TSPAN19P0C672 248 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 HMGA2P52926 109 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 FHL1Q13642 323 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 SLC17A1Q14916 467 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 TRAM2Q15035 370 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 RNPS1Q15287 305 aaKnown RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 SEC23BQ15437 767 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 MS4A18Q3C1V0 323 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 TTC33Q6PID6 262 aaPredicted RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 TBPL2Q6SJ96 375 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 FAM214BQ7L5A3 538 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 ZDHHC21Q8IVQ6 265 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 ACBD4Q8NC06 268 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 PAPD5Q8NDF8 572 aaKnown RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 ADPRHL1Q8NDY3 354 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 PFN4Q8NHR9 129 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 CANT1Q8WVQ1 401 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 TMEM239Q8WW34 195 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 POP5Q969H6 163 aaKnown RBP11.05□□□□□ -0.64
USP40-205ENST00000430158 MCUR1Q96AQ8 359 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 HS6ST2Q96MM7 605 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 SEPHS2Q99611 448 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 FNDC11Q9BVV2 318 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 SELENONQ9NZV5 590 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 B3GAT1Q9P2W7 334 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 CLEC4AQ9UMR7 237 aa11.05□□□□□ -0.64
USP40-205ENST00000430158 CADP27708 2225 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 TRBV4-1A0A0J9YWV2 114 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 LOC102725191A0A1B0GVB3 256 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 PIP5K1CO60331 668 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 CLDN14O95500 239 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 CLDN1O95832 211 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 HPRP00739 348 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 MT-ND1P03886 318 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 FABP3P05413 133 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 H1F0P07305 194 aaKnown RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 YES1P07947 543 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 ASAH2BP0C7U1 165 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 UMPSP11172 480 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 ITGA2P17301 1181 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 EDNRAP25101 427 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 GRPRP30550 384 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 AGTR1P30556 359 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 OPRM1P35372 400 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 CTBP2P56545 445 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 RASGEF1BQ0VAM2 473 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 CCNIQ14094 377 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 FLOT2Q14254 428 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 SLC25A35Q3KQZ1 300 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 OTUD3Q5T2D3 398 aaPredicted RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 PODNL1Q6PEZ8 512 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 P4HA3Q7Z4N8 544 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 TUSC5Q8IXB3 177 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 LRRC17Q8N6Y2 441 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 OR4C15Q8NGM1 316 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 RNF217Q8TC41 542 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 ACOT11Q8WXI4 607 aaPredicted RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 SLC25A36Q96CQ1 311 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 DUS3LQ96G46 650 aaKnown RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 EPYCQ99645 322 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 FANCFQ9NPI8 374 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 PLSCR4Q9NRQ2 329 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 VNN3Q9NY84 501 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
USP40-205ENST00000430158 FLVCR1Q9Y5Y0 555 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 ROS1P08922 2347 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 RTTNQ86VV8 2226 aa11.04□□□□□ -0.64
USP40-205ENST00000430158 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
USP40-205ENST00000430158 M0R082 166 aa11.03□□□□□ -0.64
USP40-205ENST00000430158 PLPP3O14495 311 aa11.03□□□□□ -0.64
USP40-205ENST00000430158 KLF4O43474 513 aa11.03□□□□□ -0.64
USP40-205ENST00000430158 CH25HO95992 272 aa11.03□□□□□ -0.64
USP40-205ENST00000430158 MT-ATP6P00846 226 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms