RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CHMP2BQ9UQN3 213 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 ACOT9Q9Y305 439 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 PSAT1Q9Y617 370 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SLC22A23A1A5C7 686 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 POC1B-GALNT4F8VUJ3 575 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF264O43296 627 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SPRY3O43610 288 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 RAB36O95755 333 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 HSPA4LO95757 839 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 PLATP00750 562 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 LCKP06239 509 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 VSIG10L2P0DP72 767 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 UROSP10746 265 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 MAKP20794 623 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 UQCRC2P22695 453 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 LCN1P31025 176 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 CD80P33681 288 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 MAGEA3P43357 314 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 FNTAP49354 379 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SH3BGRP55822 239 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SEC61A1P61619 476 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 POU6F2P78424 691 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ARF1P84077 181 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ROR2Q01974 943 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 EMX1Q04741 257 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 PIGFQ07326 219 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 C2orf80Q0P641 193 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 GALNT1Q10472 559 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 MSMPQ1L6U9 139 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 TMEM225Q6GV28 225 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 CDC73Q6P1J9 531 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 NIPAL3Q6P499 406 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 VSTM4Q8IW00 320 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 GALNT4Q8N4A0 578 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 FAM169BQ8N8A8 192 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 L3MBTL4Q8NA19 623 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ZSCAN4Q8NAM6 433 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SYNPRQ8TBG9 265 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 IPCEF1Q8WWN9 437 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 UPRTQ96BW1 309 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ELP4Q96EB1 424 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 PCGF1Q9BSM1 259 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 EBPLQ9BY08 206 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 OR11A1Q9GZK7 315 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 HOXD1Q9GZZ0 328 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 LACRTQ9GZZ8 138 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 MMP28Q9H239 520 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 RHOJQ9H4E5 214 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 C16orf95Q9H693 158 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 ACSS3Q9H6R3 686 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 NMRAL1Q9HBL8 299 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 TMEM165Q9HC07 324 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 FARSBQ9NSD9 589 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 NSMCE4AQ9NXX6 385 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SLCO1C1Q9NYB5 712 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 TMEM181Q9P2C4 612 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 CHRNA9Q9UGM1 479 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 SNX6Q9UNH7 406 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 FOXJ3Q9UPW0 622 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 MTO1Q9Y2Z2 717 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 FAM96BQ9Y3D0 163 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 HDGFL3Q9Y3E1 203 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 TNPO3Q9Y5L0 923 aaKnown RBP5.32□□□□□ -1.56
SDCBP-203ENST00000424270 COL7A1Q02388 2944 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 PLXNB1O43157 2135 aa5.32□□□□□ -1.56
SDCBP-203ENST00000424270 PLSCR5A0PG75 271 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 DNPH1O43598 174 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 SCN2BO60939 215 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 NKX2-2O95096 273 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 CLPTM1O96005 669 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PDYNP01213 254 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 OR8G3PP0DMU2 310 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 IVDP26440 423 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GTF2E2P29084 291 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 APOBEC1P41238 236 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ELK3P41970 407 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF81P51508 661 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ALDH18A1P54886 795 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 SESN3P58005 492 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 BPIFB3P59826 476 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 BTKQ06187 659 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PAX8Q06710 450 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ACSM2AQ08AH3 577 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 LCP2Q13094 533 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 MOGQ16653 247 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GSG1Q2KHT4 349 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PRAMEF8Q5VWM4 474 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PRAMEF7Q5VXH5 474 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ACSM2BQ68CK6 577 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ADAMTSL5Q6ZMM2 481 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PIWIL3Q7Z3Z3 882 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PDIK1LQ8N165 341 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GPR137CQ8N3F9 429 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 KLHDC1Q8N7A1 406 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 OR9K2Q8NGE7 335 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 MAGEE2Q8TD90 523 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 C16orf78Q8WTQ4 265 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GATAD2BQ8WXI9 593 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ST8SIA1Q92185 356 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms