RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 SOCS6O14544 535 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 SPIN3Q5JUX0 258 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 PRR22Q8IZ63 422 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 MORN4Q8NDC4 146 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 OR7G2Q8NG99 324 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 OR14L1PQ8NHC6 308 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 TMEM121BQ9BXQ6 578 aaPredicted RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 C1orf198Q9H425 327 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 APMAPQ9HDC9 416 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 SPHK1Q9NYA1 384 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 TRBV5-3A0A0A0MS03 114 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 PRKRAO75569 313 aaKnown RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 PTGER1P34995 402 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 MAN2A2P49641 1150 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF628Q5EBL2 1059 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 ABHD17BQ5VST6 288 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 MAP3K3Q99759 626 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 SPIN2AQ99865 258 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 SPIN2BQ9BPZ2 258 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 C12orf4Q9NQ89 552 aa13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF701Q9NV72 531 aaPredicted RBP13.67□□□□□ -0.22
AP000550.1-201ENST00000420508 TMEM269A0A1B0GVZ9 245 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PSMB1P20618 241 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 HLA-DMAP28067 261 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PTGS2P35354 604 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 HTR2BP41595 481 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 CSRP3P50461 194 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 MAP2K6P52564 334 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 IL10RAQ13651 578 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 MMP21Q8N119 569 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC25A44Q96H78 314 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC6A7Q99884 636 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NOX3Q9HBY0 568 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 FAM227AF5H4B4 570 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF254O75437 659 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 GYPBP06028 91 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 APOBEC1P41238 236 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 CAPZBP47756 277 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SELENOVP59797 346 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF169Q14929 603 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 MEX3DQ86XN8 651 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NKAIN4Q8IVV8 208 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NLGN4XQ8N0W4 816 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 CMTM3Q96MX0 182 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 CCL27Q9Y4X3 112 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 WIF1Q9Y5W5 379 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 UPK1AO00322 258 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC22A5O76082 557 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 KCNK2O95069 426 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 UBBP0CG47 229 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 RPS19P39019 145 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC5A7Q9GZV3 580 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ARPC1BO15143 372 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SCRG1O75711 98 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PAPLNO95428 1278 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 AQP2P41181 271 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PCBP4P57723 403 aaKnown RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NKG7Q16617 165 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NKAPLQ5M9Q1 402 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 PM20D2Q8IYS1 436 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 LNX2Q8N448 690 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NINJ1Q92982 152 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 HLA-CQ95604 372 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SENP5Q96HI0 755 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC25A18Q9H1K4 315 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 KCNN3Q9UGI6 736 aa13.66□□□□□ -0.22
AP000550.1-201ENST00000420508 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 TVP23AA6NH52 213 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 KDM4EB2RXH2 506 aaPredicted RBP13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 SURF4O15260 269 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 ATP1B1P05026 303 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 CD1CP29017 333 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 P2RX1P51575 399 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 CDKN3Q16667 212 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 TMEM201Q5SNT2 666 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 SIX5Q8N196 739 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 SMAP2Q8WU79 429 aaPredicted RBP13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 TM9SF4Q92544 642 aa13.65□□□□□ -0.22
AP000550.1-201ENST00000420508 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms