RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MAPK3P27361 379 aaPredicted RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PYCR1P32322 319 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DHPSP49366 369 aaPredicted RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EVX1P49640 407 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EGR4Q05215 589 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SGCBQ16585 318 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NKAIN1Q4KMZ8 207 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C10orf53Q8N6V4 93 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF321PQ8N8H1 164 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR5L2Q8NGL0 311 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TTC9Q92623 222 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 HTRA1Q92743 480 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DEPDC7Q96QD5 511 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LMF1Q96S06 567 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TBX5Q99593 518 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RERGLQ9H628 205 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RXFP3Q9NSD7 469 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ABRACLQ9P1F3 81 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ST6GALNAC2Q9UJ37 374 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NXT1Q9UKK6 140 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ADAM18Q9Y3Q7 739 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CABIN1Q9Y6J0 2220 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NPIPB13A6NJU9 1138 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CD8B2A6NJW9 211 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 A8MVM7 634 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NPIPB4C9JG80 1138 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FADS1O60427 444 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DCNP07585 359 aaKnown RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MRPL3P09001 348 aaKnown RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CD8BP10966 210 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MST1P26927 711 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DUSP3P51452 185 aaPredicted RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DCDP81605 110 aaKnown RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TRA2AQ13595 282 aaKnown RBP eCLIP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 YIF1BQ5BJH7 314 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TRIQKQ629K1 86 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SFXN4Q6P4A7 337 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 APOOLQ6UXV4 268 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LSM14AQ8ND56 463 aaKnown RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MOSPD2Q8NHP6 518 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ABHD4Q8TB40 342 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 THAP4Q8WY91 577 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZMYND19Q96E35 227 aaPredicted RBP13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NMNAT3Q96T66 252 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LPAR4Q99677 370 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 POLE4Q9NR33 117 aa13.24□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TEX13CA0A0J9YWL9 993 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 A0A1W2PQ09 198 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZC3H12DA2A288 527 aaKnown RBP13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR6C68A6NDL8 312 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 A8MUA0 341 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 BLOC1S5-TXNDC5H3BN57 136 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GNB5O14775 395 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF432O94892 652 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 IGHMP01871 453 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TFP02787 698 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CLEC2LP0C7M8 214 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CLUP10909 449 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MSX1P28360 303 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NR4A2P43354 598 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GDI2P50395 445 aaKnown RBP13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR12D2P58182 307 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CTXN1P60606 82 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RNF4P78317 190 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DESI1Q6ICB0 168 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MZT2BQ6NZ67 158 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GDPD3Q7L5L3 318 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 AKAP14Q86UN6 197 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LRRC17Q8N6Y2 441 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GATSQ8NAP1 163 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C19orf18Q8NEA5 215 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR6K6Q8NGW6 343 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EDAQ92838 391 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PELI1Q96FA3 418 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RNF32Q9H0A6 362 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 WDR54Q9H977 334 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 COMMD3Q9UBI1 195 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PI4KAP42356 2102 aa13.23□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ASXL3Q9C0F0 2248 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 VSTM2BA6NLU5 285 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 IDSB3KWA1 339 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 XKRYO14609 159 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NPIPB7O75200 414 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ALOX12BO75342 701 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SCRG1O75711 98 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GYPBP06028 91 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms