RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 HMGN2P05204 90 aaKnown RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CD79AP11912 226 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 EPCAMP16422 314 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FUT1P19526 365 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PTNP21246 168 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 STARD6P59095 220 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ST8SIA6P61647 398 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ACTA2P62736 377 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ACTG2P63267 376 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FOXK2Q01167 660 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 POU4F2Q12837 409 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 RNF113BQ8IZP6 322 aaKnown RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 RASGEF1AQ8N9B8 481 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 OR51S1Q8NGJ8 323 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 OR5M8Q8NGP6 311 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 HS6ST2Q96MM7 605 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 F2RL3Q96RI0 385 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CD180Q99467 661 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 KLF16Q9BXK1 252 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 TTTY10Q9BZA0 68 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 DPH1Q9BZG8 443 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 EXO5Q9H790 373 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 KLHL28Q9NXS3 571 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC35A3Q9Y2D2 325 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ETV7Q9Y603 341 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 KCNE3Q9Y6H6 103 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 H7BY64 318 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 MAGEB4O15481 346 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 TMPRSS11DO60235 418 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PPP1R3DO95685 299 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 DLSTP36957 453 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PPT1P50897 306 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CAPZA1P52907 286 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF124Q15973 351 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CDNFQ49AH0 187 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 VWA2Q5GFL6 755 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 BEX5Q5H9J7 111 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 GDF6Q6KF10 455 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FUT10Q6P4F1 479 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 ZCCHC12Q6PEW1 402 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 GLB1LQ6UWU2 654 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM64Q6YI46 380 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 GTPBP8Q8N3Z3 284 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 BBS4Q96RK4 519 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 AP5M1Q9H0R1 490 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC7A7Q9UM01 511 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 COL4A3Q01955 1670 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 MAN2B1O00754 1011 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PHYHO14832 338 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 GPRIN2O60269 458 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 AGAP20933 346 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 MPIP34949 423 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CASRP41180 1078 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PRLHRP49683 370 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PGDP52209 483 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 RAB33AQ14088 237 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2B11Q5JQS5 317 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FAM129CQ86XR2 697 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 WDSUB1Q8N9V3 476 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 STEAP2Q8NFT2 490 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PAQR8Q8TEZ7 354 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 CCDC107Q8WV48 283 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 TIFAQ96CG3 184 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 MS4A8Q9BY19 250 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 LHX9Q9NQ69 397 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 MMP26Q9NRE1 261 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 SMCO4Q9NRQ5 59 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 DCAF16Q9NXF7 216 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FBXL4Q9UKA2 621 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 F5H0A9 414 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ITGB2P05107 769 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ANXA2P07355 339 aaKnown RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 MELTFP08582 738 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 OR4E1P0C645 316 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TMIGD3P0DMS9 266 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 GPX4P36969 197 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 HSD17B2P37059 387 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TGM3Q08188 693 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 LPCAT3Q6P1A2 487 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ENPP7Q6UWV6 458 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 PARGQ86W56 976 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 OR9A1PQ8NGU1 263 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 CXorf40AQ8TE69 158 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 OVCA2Q8WZ82 227 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC39A7Q92504 469 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 EDEM2Q9BV94 578 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 POFUT1Q9H488 388 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 SDHAF3Q9NRP4 125 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 C2orf42Q9NWW7 574 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 WBP1LQ9NX94 342 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 COMMD9Q9P000 198 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RCC2Q9P258 522 aaKnown RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF223Q9UK11 482 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 PRUNE2Q8WUY3 3088 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 MYO15AQ9UKN7 3530 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 A0A1W2PPE3 182 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 GGT3PA6NGU5 568 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RIIAD1A6NNX1 92 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms