RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CKAP4Q07065 602 aaKnown RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 CCDC92Q53HC0 331 aaPredicted RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 CAVIN4Q5BKX8 364 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 RESP18Q5W5W9 173 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ATL3Q6DD88 541 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 SYT10Q6XYQ8 523 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ARMCX2Q7L311 632 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 PLA2G4DQ86XP0 818 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF573Q86YE8 665 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF100Q8IYN0 542 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 OR2AP1Q8NGE2 309 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 MARC2Q969Z3 335 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 SLC6A7Q99884 636 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF416Q9BWM5 594 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 GLIPR2Q9H4G4 154 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ZSCAN16Q9H4T2 348 aaPredicted RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 AIPL1Q9NZN9 384 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 CD274Q9NZQ7 290 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 LCMT1Q9UIC8 334 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 UBQLN1Q9UMX0 589 aaKnown RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 AURKCQ9UQB9 309 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 SCML2Q9UQR0 700 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 PLLPQ9Y342 182 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 FRMPD3Q5JV73 1810 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 FRMPD4Q14CM0 1322 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 A0A1B0GVL5 298 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 A0A1B0GWJ7 208 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 BICDL2A1A5D9 508 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 PINLYPA6NC86 204 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SULT2B1O00204 365 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 MAPK13O15264 365 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 LALBAP00709 142 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 KRT8P05787 483 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 HPNP05981 417 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 RNH1P13489 461 aaKnown RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 NCF1P14598 390 aaPredicted RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 CYP2B6P20813 491 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 FUT3P21217 361 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 EPHX2P34913 555 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 DLSTP36957 453 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 HNRNPA3P51991 378 aaKnown RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 PLA2G16P53816 162 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 FKBP1AP62942 108 aaKnown RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 EWSR1Q01844 656 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 CHRNB3Q05901 458 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SLC10A7Q0GE19 358 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 HERPUD1Q15011 391 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SLC15A2Q16348 729 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 RIPPLY2Q5TAB7 128 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 APOBEC3HQ6NTF7 200 aaKnown RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 C16orf62Q7Z3J2 963 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 DEFB132Q7Z7B7 95 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ZSCAN30Q86W11 494 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SVOPLQ8N434 492 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ALLCQ8N6M5 410 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 FAM184AQ8NB25 1140 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 RNF138Q8WVD3 245 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 OR1E3Q8WZA6 343 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ESR2Q92731 530 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SYAP1Q96A49 352 aaPredicted RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ZBED3Q96IU2 234 aaPredicted RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF396Q96N95 335 aaPredicted RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SPZ1Q9BXG8 430 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 COA1Q9GZY4 146 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 COQ10BQ9H8M1 238 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SH2D2AQ9NP31 389 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 NANSQ9NR45 359 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 HPF1Q9NWY4 346 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 NAP1L2Q9ULW6 460 aaPredicted RBP2.53□□□□□ -2
HMGB1P11-201ENST00000413899 PYCARDQ9ULZ3 195 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 KIF3AQ9Y496 699 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 ATP6V1DQ9Y5K8 247 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SLCO1B1Q9Y6L6 691 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 TRPM7Q96QT4 1865 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 SCN4AP35499 1836 aa2.53□□□□□ -2
HMGB1P11-201ENST00000413899 H3BQV1 296 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 FCN1O00602 326 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZSCAN12O43309 604 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 HCRTR1O43613 425 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 B3GALNT1O75752 331 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 ADCY5O95622 1261 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 ASNSP08243 561 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 H2BFMP0C1H6 154 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 NR2C1P13056 603 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 CMA1P23946 247 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 PLK1P53350 603 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 AP3M2P53677 418 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 TLE4Q04727 773 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 TRDNQ13061 729 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 PNOCQ13519 176 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 FAM71F2Q6NXP2 309 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 UNQ9370/PRO34162Q6UXP9 181 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 CLDN19Q8N6F1 224 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 TMEM252Q8N6L7 170 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR10A7Q8NGE5 316 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR10T2Q8NGX3 314 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 PNPT1Q8TCS8 783 aaKnown RBP2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 RAET1EQ8TD07 263 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms