RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
LITAF-203ENST00000413364 LSM2Q9Y333 95 aaKnown RBP11.96□□□□□ -0.49
LITAF-203ENST00000413364 SLC6A5Q9Y345 797 aa11.96□□□□□ -0.49
LITAF-203ENST00000413364 PCDHGB7Q9Y5F8 929 aa11.96□□□□□ -0.49
LITAF-203ENST00000413364 EYSQ5T1H1 3165 aa11.96□□□□□ -0.5
LITAF-203ENST00000413364 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 CLDN4O14493 209 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 TERTO14746 1132 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 PIP5K1CO60331 668 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 TSPAN19P0C672 248 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 IL9P15248 144 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■■□ 22.8
LITAF-203ENST00000413364 STOMP27105 288 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 HTR2AP28223 471 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 GPR4P46093 362 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 EMDP50402 254 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 MAT1AQ00266 395 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 MED22Q15528 200 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 C19orf48Q6RUI8 117 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 PGAP1Q75T13 922 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 SHFQ7M4L6 423 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 ZAR1Q86SH2 424 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 LAX1Q8IWV1 398 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 POGLUT1Q8NBL1 392 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 UPRTQ96BW1 309 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 RBM18Q96H35 190 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 TMEM41AQ96HV5 264 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 GFM1Q96RP9 751 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 PRSS27Q9BQR3 290 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 NKX6-2Q9C056 277 aaPredicted RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 RAB33BQ9H082 229 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 PDE7BQ9NP56 450 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 KRCC1Q9NPI7 259 aaPredicted RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 SOHLH2Q9NX45 425 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 LYRM1O43325 122 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 LYPD3O95274 346 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 CD63P08962 238 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 GKN3PP0CG01 181 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 GNSP15586 552 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 RGS19P49795 217 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 EPHA4P54764 986 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 DEFA6Q01524 100 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 SRSF5Q13243 272 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 PON3Q15166 354 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 TSTQ16762 297 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 RNF212Q495C1 297 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 PYDC2Q56P42 97 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 SLC36A4Q6YBV0 504 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 GDPGP1Q6ZNW5 385 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 SLC34A3Q8N130 599 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 SPACA7Q96KW9 195 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 HS6ST2Q96MM7 605 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 CD180Q99467 661 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 WNT5BQ9H1J7 359 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 NLKQ9UBE8 527 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 TESQ9UGI8 421 aaKnown RBP11.95□□□□□ -0.5
LITAF-203ENST00000413364 CLEC2DQ9UHP7 191 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
LITAF-203ENST00000413364 FITM1A5D6W6 292 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 RHPN2P1A8MT19 583 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SDC3O75056 442 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CDC123O75794 336 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 PIAS2O75928 621 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 HEXBP07686 556 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CSNK1EP49674 416 aaKnown RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 PSG6Q00889 435 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 DOC2BQ14184 412 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 OR1Q1Q15612 314 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SSX2Q16385 188 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 C21orf62-AS1Q17RA5 79 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 KLHL22Q53GT1 634 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 VASNQ6EMK4 673 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 ZNF620Q6ZNG0 422 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 STPG2Q8N412 459 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CLDN22Q8N7P3 220 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 EDARADDQ8WWZ3 215 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 VSTM2LQ96N03 204 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 DGAT2Q96PD7 388 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 TAPBPLQ9BX59 468 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 C1QTNF6Q9BXI9 259 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CAPN10Q9HC96 672 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 MRPS18AQ9NVS2 196 aaKnown RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 ZNF223Q9UK11 482 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 CLDN16Q9Y5I7 305 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CDH10Q9Y6N8 788 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 PRODHO43272 600 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 ZNF749O43361 778 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CFDP00746 253 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 SCG5P05408 212 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CKMT1AP12532 417 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 BCKDHBP21953 392 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SSTR4P31391 388 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 GPX4P36969 197 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms