RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OR5J2Q8NH18 312 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 OR14L1PQ8NHC6 308 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MFSD8Q8NHS3 518 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ZNF417Q8TAU3 575 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SGCDQ92629 289 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ZDHHC16Q969W1 377 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 RELTQ969Z4 430 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC25A36Q96CQ1 311 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 DTNBP1Q96EV8 351 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 PLEKHA8Q96JA3 519 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 LRR1Q96L50 414 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ZNF587Q96SQ5 575 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 PIGQQ9BRB3 760 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 KATNB1Q9BVA0 655 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ASPNQ9BXN1 380 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 POTEKPQ9BYX7 375 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 TTTY12Q9BZ98 90 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 NDEL1Q9GZM8 345 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS41-204ENST00000413141 FN3KQ9H479 309 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CCDC86Q9H6F5 360 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 NRIP3Q9NQ35 241 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 KLHL1Q9NR64 748 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CMC2Q9NRP2 79 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 PLCXD1Q9NUJ7 323 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FKBP14Q9NWM8 211 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CLN6Q9NWW5 311 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ALKBH4Q9NXW9 302 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MRPL39Q9NYK5 338 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 DNAJC27Q9NZQ0 273 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 B4GALT7Q9UBV7 327 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GPR52Q9Y2T5 361 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC6A5Q9Y345 797 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MRPS18CQ9Y3D5 142 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 ADAM18Q9Y3Q7 739 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CSAG2Q9Y5P2 127 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CORINQ9Y5Q5 1042 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CEP295Q9C0D2 2601 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 EML6Q6ZMW3 1958 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 PCNX3Q9H6A9 2034 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 NCKAP5O14513 1909 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 A0A087WXM4 84 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 TEX13CA0A0J9YWL9 993 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 RIIAD1A6NNX1 92 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 FAM166BA8MTA8 275 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 BLOC1S5-TXNDC5H3BN57 136 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 KLRC4-KLRK1H3BQV0 150 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 PLPP3O14495 311 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ARPC3O15145 178 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 PRODHO43272 600 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 CLPTM1O96005 669 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 IGHMP01871 453 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 HIST1H2ABP04908 130 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 F13BP05160 661 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 HPNP05981 417 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 CD14P08571 375 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ADRB1P08588 477 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ADORA3P0DMS8 318 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 APEHP13798 732 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ATP6V1B1P15313 513 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 HIST1H1CP16403 213 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZNF3P17036 446 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 EEF1B2P24534 225 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 NOS3P29474 1203 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 SFTPDP35247 375 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 RFC3P40938 356 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 EIF2S3P41091 472 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ID4P47928 161 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 CLK1P49759 484 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 GFRA1P56159 465 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ERVK-25P63136 954 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 CSNK2BP67870 215 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 TUBA4AP68366 448 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZNF91Q05481 1191 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 PMS2P3Q13401 168 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 TOMM20Q15388 145 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 HYAL4Q2M3T9 481 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZNF766Q5HY98 468 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 WIPI1Q5MNZ9 446 aaPredicted RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 SLC35F1Q5T1Q4 408 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 AADACL4Q5VUY2 407 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 MEDAGQ5VYS4 303 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 NXNL2Q5VZ03 156 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 AHSA2Q719I0 299 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 HIST3H2AQ7L7L0 130 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 FAM122BQ7Z309 247 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 YRDCQ86U90 279 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZFP62Q8NB50 900 aaPredicted RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 TMEM178AQ8NBL3 297 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 LSM14AQ8ND56 463 aaKnown RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZNF540Q8NDQ6 660 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ADPRHL1Q8NDY3 354 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 BBS1Q8NFJ9 593 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 IPCEF1Q8WWN9 437 aaPredicted RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 HIST1H2ACQ93077 130 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 MIB2Q96AX9 1013 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 Q96MT0 163 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 SFXN2Q96NB2 322 aa5.98□□□□□ -1.45
VPS41-204ENST00000413141 ZNF582Q96NG8 517 aaPredicted RBP5.98□□□□□ -1.45
VPS41-204ENST00000413141 ERMAPQ96PL5 475 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms