RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 GPAT4Q86UL3 456 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 OR5M9Q8NGP3 310 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 SLC25A43Q8WUT9 341 aaPredicted RBP11.29□□□□□ -0.6
PMS1-204ENST00000409823 DNAJC9Q8WXX5 260 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 TIMP4Q99727 224 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 TAPBPLQ9BX59 468 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 TUBD1Q9UJT1 453 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 ADAM18Q9Y3Q7 739 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 AP4B1Q9Y6B7 739 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 CXCL13O43927 109 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 GSTM3P21266 225 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 RPL4P36578 427 aaKnown RBP11.29□□□□□ -0.6
PMS1-204ENST00000409823 CRISP1P54107 249 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 CLDN18P56856 261 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 COX10Q12887 443 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 HBMQ6B0K9 141 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 OSTF1Q92882 214 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
PMS1-204ENST00000409823 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
PMS1-204ENST00000409823 TSSK6Q9BXA6 273 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 TBC1D23Q9NUY8 699 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 COL12A1Q99715 3063 aa11.29□□□□□ -0.6
PMS1-204ENST00000409823 LOC100130705A0A1B0GUX0 176 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 MCIDASD6RGH6 385 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 OR2T1O43869 369 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 PTP4A3O75365 173 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CARD18P57730 90 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 RPL18Q07020 188 aaKnown RBP11.28□□□□□ -0.6
PMS1-204ENST00000409823 RASSF6Q6ZTQ3 369 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 MAMDC2Q7Z304 686 aaPredicted RBP11.28□□□□□ -0.6
PMS1-204ENST00000409823 MIB2Q96AX9 1013 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 POTEKPQ9BYX7 375 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 QPCTLQ9NXS2 382 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 TAS2R5Q9NYW4 299 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 RNF13O43567 381 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 MAP2K6P52564 334 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 GINS1Q14691 196 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 SGCBQ16585 318 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CD300LDQ6UXZ3 194 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 PARP8Q8N3A8 854 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 TEX47Q8TBZ9 253 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ROBO4Q8WZ75 1007 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 MUS81Q96NY9 551 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 IFT27Q9BW83 186 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ASF1BQ9NVP2 202 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 HDGFL3Q9Y3E1 203 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 HCN1O60741 890 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 PPP1R3DO95685 299 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CDH2P19022 906 aaPredicted RBP11.28□□□□□ -0.6
PMS1-204ENST00000409823 ERVK-25P63136 954 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
PMS1-204ENST00000409823 ALG10Q5BKT4 473 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ESPNLQ6ZVH7 1005 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
PMS1-204ENST00000409823 OR5J2Q8NH18 312 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ASPNQ9BXN1 380 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 GABARAPL3Q9BY60 117 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 CDH10Q9Y6N8 788 aa11.28□□□□□ -0.6
PMS1-204ENST00000409823 ADGRG4Q8IZF6 3080 aa11.27□□□□□ -0.6
PMS1-204ENST00000409823 GJE1A6NN92 205 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 KDM4EB2RXH2 506 aaPredicted RBP11.27□□□□□ -0.61
PMS1-204ENST00000409823 BCKDKO14874 412 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 OR6A2O95222 327 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 ZNF708P17019 499 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 GIPRP48546 466 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
PMS1-204ENST00000409823 RFX4Q33E94 735 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 RPUSD3Q6P087 351 aaKnown RBP11.27□□□□□ -0.61
PMS1-204ENST00000409823 ZNF555Q8NEP9 628 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 OR4Q3Q8NH05 313 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
PMS1-204ENST00000409823 GPR52Q9Y2T5 361 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms