RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
CHMP3-205ENST00000409810 MED18Q9BUE0 208 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 HDHD5Q9BXW7 423 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 SLC19A3Q9BZV2 496 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 KLHL4Q9C0H6 718 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 OR10A4Q9H209 315 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF226Q9NYT6 803 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 GMPR2Q9P2T1 348 aaKnown RBP9.68□□□□□ -0.86
CHMP3-205ENST00000409810 EGFL7Q9UHF1 273 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 B3GALT5Q9Y2C3 310 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 GPR52Q9Y2T5 361 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 FLVCR1Q9Y5Y0 555 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 ABCA4P78363 2273 aa9.68□□□□□ -0.86
CHMP3-205ENST00000409810 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 RAMP1O60894 148 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 NQO1P15559 274 aaKnown RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 NCK1P16333 377 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF43P17038 809 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 TCN1P20061 433 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 PSMB1P20618 241 aaKnown RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 IL32P24001 234 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 GRPRP30550 384 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 RBM34P42696 430 aaKnown RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 IL1RL1Q01638 556 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 P2RY6Q15077 328 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 FXNQ16595 210 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 FBXW10Q5XX13 1052 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 LINC00114Q6XXX2 140 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 Q6ZT83 130 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 H1FNTQ75WM6 255 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 VTCN1Q7Z7D3 282 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 TMEM200AQ86VY9 491 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 CYP4Z1Q86W10 505 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 UBE2J2Q8N2K1 259 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 RNF148Q8N7C7 305 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 STEAP2Q8NFT2 490 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 KISS1RQ969F8 398 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 TAAR8Q969N4 342 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-205ENST00000409810 NSMCE2Q96MF7 247 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 HS6ST2Q96MM7 605 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 OXGR1Q96P68 337 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 FNDC11Q9BVV2 318 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 GORASP2Q9H8Y8 452 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 FKRPQ9H9S5 495 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 MCCC2Q9HCC0 563 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 CD300AQ9UGN4 299 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 TESMINQ9Y4I5 508 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 SNX13Q9Y5W8 968 aa9.67□□□□□ -0.86
CHMP3-205ENST00000409810 OR6C65A6NJZ3 312 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 A6NNC1 897 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 M0R082 166 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 OR6A2O95222 327 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 STAMBPO95630 424 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ADAP00813 363 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 IGF2P01344 180 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 BGLAPP02818 100 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 CCKARP32238 428 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 P2RY4P51582 365 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ITGADQ13349 1161 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 PMS2P3Q13401 168 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 PIN1Q13526 163 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 C1DQ13901 141 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 DAZAP2Q15038 168 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 FBXW9Q5XUX1 488 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 STAC2Q6ZMT1 411 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 SSX8Q7RTT4 187 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 AAED1Q7RTV5 226 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ABHD12BQ7Z5M8 362 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 P3H2Q8IVL5 708 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 OFCC1Q8IZS5 231 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 GABRG1Q8N1C3 465 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 FAM156AQ8NDB6 213 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 RBM15BQ8NDT2 890 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 TMEM239Q8WW34 195 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 MCUR1Q96AQ8 359 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ZNF426Q9BUY5 554 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 C1orf21Q9H246 121 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 NANSQ9NR45 359 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 DCAF13Q9NV06 445 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 ASB6Q9NWX5 421 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 UPB1Q9UBR1 384 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 RIMS3Q9UJD0 308 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 PRPF19Q9UMS4 504 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 MED31Q9Y3C7 131 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 FAM32AQ9Y421 112 aaKnown RBP9.66□□□□□ -0.86
CHMP3-205ENST00000409810 DCHS2Q6V1P9 2916 aa9.66□□□□□ -0.86
CHMP3-205ENST00000409810 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
CHMP3-205ENST00000409810 ABCA12Q86UK0 2595 aa9.65□□□□□ -0.86
CHMP3-205ENST00000409810 HTR3EA5X5Y0 456 aa9.65□□□□□ -0.86
CHMP3-205ENST00000409810 KPNA4O00629 521 aaPredicted RBP9.65□□□□□ -0.86
CHMP3-205ENST00000409810 ARPC2O15144 300 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms