RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 NKX6-1P78426 367 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 RHEBQ15382 184 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LRFN4Q6PJG9 635 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 CNOT9Q92600 299 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 ZNF700Q9H0M5 742 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 MTHFD2LQ9H903 347 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 MKKSQ9NPJ1 570 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LYARQ9NX58 379 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 DCAF16Q9NXF7 216 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 TRDV1A0A1B0GX56 115 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 H7C1C5 153 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LANCL1O43813 399 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 IFNA17P01571 189 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 S100A8P05109 93 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 CA3P07451 260 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 TRAPPC2P0DI81 140 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 TRAPPC2BP0DI82 140 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 GABRB1P18505 474 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 P2RY2P41231 377 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 GRK6P43250 576 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 EIF1AXP47813 144 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PTH2RP49190 550 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PCBP3P57721 371 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LCN6P62502 163 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 OR1Q1Q15612 314 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 FRMD1Q8N878 549 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 OR5K2Q8NHB8 316 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 ELP4Q96EB1 424 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 CHFRQ96EP1 664 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 S100A16Q96FQ6 103 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 SLC6A18Q96N87 628 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 KXD1Q9BQD3 176 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PCDHGB7Q9Y5F8 929 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 SLC22A7Q9Y694 548 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PLGP00747 810 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PIPP12273 146 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 CPMP14384 443 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 HSD17B2P37059 387 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 ADAM8P78325 824 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 Q5BKY6 102 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 APOOLQ6UXV4 268 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 MEPCEQ7L2J0 689 aaKnown RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 ASPGQ86U10 573 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LRRC28Q86X40 367 aaPredicted RBP11.05□□□□□ -0.64
HMGB1-206ENST00000405805 OR2L5Q8NG80 312 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 OR6S1Q8NH40 331 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 LGALS14Q8TCE9 139 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 PHOSPHO1Q8TCT1 267 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
HMGB1-206ENST00000405805 MYO16Q9Y6X6 1858 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 A0A1B0GV90 55 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 EDN3P14138 238 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 RSU1Q15404 277 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ZNF793Q6ZN11 406 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 RASGRP3Q8IV61 690 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 NRSN1Q8IZ57 195 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 OR5M3Q8NGP4 307 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 HAVCR2Q8TDQ0 301 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 NPAS1Q99742 590 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 K7EPK0 472 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 EIF1AYO14602 144 aaKnown RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 IFNA6P05013 189 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 FPR3P25089 353 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 YOD1Q5VVQ6 348 aaPredicted RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 FAM71E2Q8N5Q1 922 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 WFIKKN2Q8TEU8 576 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 FCAMRQ8WWV6 532 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ATF6BQ99941 703 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 VRK1Q99986 396 aaPredicted RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 TCEAL2Q9H3H9 227 aaPredicted RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 CCDC86Q9H6F5 360 aaKnown RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ACSS1Q9NUB1 689 aaPredicted RBP11.04□□□□□ -0.64
HMGB1-206ENST00000405805 RALGAPA2Q2PPJ7 1873 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 EEF1E1-BLOC1S5C9J1V9 151 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 APODP05090 189 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 RAB6AP20340 208 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 PRKAR1BP31321 381 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 SLC6A6P31641 620 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 GDNFP39905 211 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 HMGA2P52926 109 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 SORDQ00796 357 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 TPBGQ13641 420 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ENPP2Q13822 863 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 DUSP5Q16690 384 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 C12orf73Q69YU5 71 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 GLRX5Q86SX6 157 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 JAGN1Q8N5M9 183 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 ZNF511Q8NB15 262 aa11.04□□□□□ -0.64
HMGB1-206ENST00000405805 DNAAF1Q8NEP3 725 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms