RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 NOS3P29474 1203 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 RPL4P36578 427 aaKnown RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 RPS5P46782 204 aaKnown RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 TIGD3Q6B0B8 471 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 SATL1Q86VE3 508 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 PSD4Q8NDX1 1056 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 ANKK1Q8NFD2 765 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 SGCDQ92629 289 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 ZNF582Q96NG8 517 aaPredicted RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 MOGAT1Q96PD6 335 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 TUBA1CQ9BQE3 449 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 UTP23Q9BRU9 249 aaKnown RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 PROK2Q9HC23 129 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 AMBNQ9NP70 447 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 FBXL2Q9UKC9 423 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.98■□□□□ 0.63
TPM1-208ENST00000404484 CFAP46Q8IYW2 2715 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 PPP1R3DO95685 299 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 CDK1P06493 297 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 ZNF3P17036 446 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 ST13P50502 369 aaKnown RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 DSCR4P56555 118 aaPredicted RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 GPR141Q7Z602 305 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 GID4Q8IVV7 300 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 SLC25A43Q8WUT9 341 aaPredicted RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 POTEKPQ9BYX7 375 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 ENKD1Q9H0I2 346 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 H2AFY2Q9P0M6 372 aaPredicted RBP18.98■□□□□ 0.63
TPM1-208ENST00000404484 KLHL21Q9UJP4 597 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 HRH3Q9Y5N1 445 aa18.98■□□□□ 0.63
TPM1-208ENST00000404484 MPDZO75970 2070 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 DOCK10Q96BY6 2186 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 ARPC3O15145 178 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 CBR3O75828 277 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 C1QL1O75973 258 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 DBTP11182 482 aaKnown RBP18.97■□□□□ 0.63
TPM1-208ENST00000404484 APEHP13798 732 aaKnown RBP18.97■□□□□ 0.63
TPM1-208ENST00000404484 PAICSP22234 425 aaKnown RBP18.97■□□□□ 0.63
TPM1-208ENST00000404484 UQCRC1P31930 480 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 SLC15A1P46059 708 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 SOX8P57073 446 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 ZNF91Q05481 1191 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 NEDD8Q15843 81 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 NXNL2Q5VZ03 156 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 C3orf33Q6P1S2 294 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 MDGA2Q7Z553 956 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 GALNT16Q8N428 558 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 ERMAPQ96PL5 475 aaPredicted RBP18.97■□□□□ 0.63
TPM1-208ENST00000404484 SIGLEC11Q96RL6 698 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 PTDSS2Q9BVG9 487 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 GPR83Q9NYM4 423 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 LRFN1Q9P244 771 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 GPR52Q9Y2T5 361 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 CORINQ9Y5Q5 1042 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 PCNX3Q9H6A9 2034 aa18.97■□□□□ 0.63
TPM1-208ENST00000404484 ZC3H12DA2A288 527 aaKnown RBP18.96■□□□□ 0.63
TPM1-208ENST00000404484 ARGFXA6NJG6 315 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 BLOC1S5-TXNDC5H3BN57 136 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 TRIM3O75382 744 aaPredicted RBP18.96■□□□□ 0.63
TPM1-208ENST00000404484 MT-ND2P03891 347 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 TSPAN19P0C672 248 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 DPP4P27487 766 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 MLLT10P55197 1068 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 LTBQ06643 244 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 PIGFQ07326 219 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 ST3GAL4Q11206 333 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 SELENBP1Q13228 472 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 INPP5JQ15735 1006 aaPredicted RBP18.96■□□□□ 0.63
TPM1-208ENST00000404484 KLHL22Q53GT1 634 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 ALG10Q5BKT4 473 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 CXXC5Q7LFL8 322 aaKnown RBP18.96■□□□□ 0.63
TPM1-208ENST00000404484 C9orf43Q8TAL5 461 aaPredicted RBP18.96■□□□□ 0.63
TPM1-208ENST00000404484 FCGR1BQ92637 280 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 ASPNQ9BXN1 380 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 ANKRD10Q9NXR5 420 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 DKKL1Q9UK85 242 aa18.96■□□□□ 0.63
TPM1-208ENST00000404484 MCIDASD6RGH6 385 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 CD14P08571 375 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 GTF2E2P29084 291 aaKnown RBP18.95■□□□□ 0.62
TPM1-208ENST00000404484 CLK1P49759 484 aaKnown RBP18.95■□□□□ 0.62
TPM1-208ENST00000404484 SGCBQ16585 318 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 AADACL4Q5VUY2 407 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 GTPBP8Q8N3Z3 284 aaPredicted RBP18.95■□□□□ 0.62
TPM1-208ENST00000404484 OR5J2Q8NH18 312 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 MFSD8Q8NHS3 518 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 JSRP1Q96MG2 331 aaPredicted RBP18.95■□□□□ 0.62
TPM1-208ENST00000404484 RHNO1Q9BSD3 238 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 NRIP3Q9NQ35 241 aa18.95■□□□□ 0.62
TPM1-208ENST00000404484 PRR23D1E9PI22 279 aaPredicted RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 IMPA2O14732 288 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 PRR23D2P0DMB1 279 aaPredicted RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 CNR1P21554 472 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 IDUAP35475 653 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 CD96P40200 585 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 AQP2P41181 271 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 CDH11P55287 796 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 TMED1Q13445 227 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 TUBA3CQ13748 450 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 GLYR1Q49A26 553 aaPredicted RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 SLC35F1Q5T1Q4 408 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms