RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CASP12Q6UXS9 341 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 B3GLCTQ6Y288 498 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 C17orf78Q8N4C9 275 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 C1orf162Q8NEQ5 155 aaPredicted RBP10.83□□□□□ -0.68
PRAME-204ENST00000403441 C10orf105Q8TEF2 133 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 WDR60Q8WVS4 1066 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 CNOT9Q92600 299 aaKnown RBP10.83□□□□□ -0.68
PRAME-204ENST00000403441 PROX1Q92786 737 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 TMEM19Q96HH6 336 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 CPPED1Q9BRF8 314 aaPredicted RBP10.83□□□□□ -0.68
PRAME-204ENST00000403441 CCDC106Q9BWC9 280 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 RSPO3Q9BXY4 272 aaPredicted RBP10.83□□□□□ -0.68
PRAME-204ENST00000403441 TMEM38AQ9H6F2 299 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
PRAME-204ENST00000403441 AMDHD2Q9Y303 409 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 FKBP7Q9Y680 259 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
PRAME-204ENST00000403441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.83□□□□□ -0.685e-19■■■□□ 18.1
PRAME-204ENST00000403441 HAX1O00165 279 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 SRD5A1P18405 259 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 NCF2P19878 526 aaPredicted RBP10.82□□□□□ -0.68
PRAME-204ENST00000403441 HNF1AP20823 631 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 THBS2P35442 1172 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 CLK1P49759 484 aaKnown RBP10.82□□□□□ -0.68
PRAME-204ENST00000403441 GZMKP49863 264 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 SLC16A1P53985 500 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 GNA13Q14344 377 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 ADRM1Q16186 407 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 GABRA6Q16445 453 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 ZSWIM7Q19AV6 140 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 KRTAP24-1Q3LI83 254 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 RUNDC3AQ59EK9 446 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 COQ5Q5HYK3 327 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 MRPL2Q5T653 305 aaKnown RBP10.82□□□□□ -0.68
PRAME-204ENST00000403441 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 GRINAQ7Z429 371 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 C10orf82Q8WW14 230 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 SLC35B4Q969S0 331 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 ANKRD27Q96NW4 1050 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 MUS81Q96NY9 551 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 C1QTNF6Q9BXI9 259 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 SAR1AQ9NR31 198 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 CTPS2Q9NRF8 586 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 PARPBPQ9NWS1 579 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 KLHL14Q9P2G3 628 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 UPB1Q9UBR1 384 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 KCNS2Q9ULS6 477 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 SLC9A8Q9Y2E8 581 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 NDUFAF1Q9Y375 327 aa10.82□□□□□ -0.68
PRAME-204ENST00000403441 FBP2O00757 339 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 SLC22A2O15244 555 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 LMX1BO60663 402 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ITGA5P08648 1049 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ETS2P15036 469 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
PRAME-204ENST00000403441 RYKP34925 604 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ACAA2P42765 397 aaKnown RBP10.81□□□□□ -0.68
PRAME-204ENST00000403441 HTR3AP46098 478 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ARFIP2P53365 341 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 OR2B6P58173 313 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 LSM11P83369 360 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRAME-204ENST00000403441 EPS8Q12929 822 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 LIN52Q52LA3 116 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 FAM166AQ6J272 317 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ZNF836Q6ZNA1 936 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 NET1Q7Z628 596 aaPredicted RBP10.81□□□□□ -0.68
PRAME-204ENST00000403441 HMGN2P46Q86SG4 172 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 PEX5LQ8IYB4 626 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 OR52E4Q8NGH9 312 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 OR52P1PQ8NH57 321 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 BBS10Q8TAM1 723 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 MAL2Q969L2 176 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 DNAJA3Q96EY1 480 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ARL5BQ96KC2 179 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 PIMREGQ9BSJ6 248 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 C19orf24Q9BVV8 132 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 OR11A1Q9GZK7 315 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 TMEM181Q9P2C4 612 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 CORO2BQ9UQ03 480 aa10.81□□□□□ -0.68
PRAME-204ENST00000403441 ZNF443Q9Y2A4 671 aaPredicted RBP10.81□□□□□ -0.68
PRAME-204ENST00000403441 ATP6V1G2-DDX39BF2Z307 99 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 FXYD1O00168 92 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 NDUFS8O00217 210 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 AP3D1O14617 1153 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 EIF1BO60739 113 aaKnown RBP10.8□□□□□ -0.68
PRAME-204ENST00000403441 WNT11O96014 354 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 VIMP08670 466 aaKnown RBP10.8□□□□□ -0.68
PRAME-204ENST00000403441 IL7RP16871 459 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 PDLIM4P50479 330 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 PCBP3P57721 371 aaKnown RBP10.8□□□□□ -0.68
PRAME-204ENST00000403441 PRPS1P60891 318 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 SNRPD2P62316 118 aaKnown RBP10.8□□□□□ -0.68
PRAME-204ENST00000403441 SLC35A1P78382 337 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 KLF10Q13118 480 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 GGTLC2Q14390 218 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 RPS26P11Q5JNZ5 115 aaPredicted RBP10.8□□□□□ -0.68
PRAME-204ENST00000403441 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
PRAME-204ENST00000403441 DHDDSQ86SQ9 333 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms