RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GPR171O14626 319 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CLOCKO15516 846 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TPST2O60704 377 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 EIF1BO60739 113 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 NPIPB7O75200 414 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 MRPL33O75394 65 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 AHSA1O95433 338 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 GPIP06744 558 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ITGA5P08648 1049 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 VIMP08670 466 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TROVE2P10155 538 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CD99P14209 185 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ETS2P15036 469 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 COX5AP20674 150 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CBLP22681 906 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC6A2P23975 617 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 FKBP2P26885 142 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PRKAR1BP31321 381 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 RPS5P46782 204 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 P2RY4P51582 365 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARFIP2P53365 341 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC16A1P53985 500 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 RGS8P57771 180 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ADAM8P78325 824 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 EGR4Q05215 589 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 LGALS3BPQ08380 585 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 FAPQ12884 760 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC17A1Q14916 467 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 P2RY6Q15077 328 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PDK3Q15120 406 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PPA1Q15181 289 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ACKR1Q16570 336 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CYP51A1Q16850 503 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 RABL3Q5HYI8 236 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 NCMAPQ5T1S8 102 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TSPO2Q5TGU0 170 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 FBXW9Q5XUX1 488 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 DHRS4L2Q6PKH6 230 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PAQR6Q6TCH4 344 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 GPAT4Q86UL3 456 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 KRT73Q86Y46 540 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TGIF2LYQ8IUE0 185 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 KRTAP1-3Q8IUG1 177 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARMC8Q8IUR7 673 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 KDM8Q8N371 416 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 DPP10Q8N608 796 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZIC4Q8N9L1 334 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 HIPK4Q8NE63 616 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 KBTBD8Q8NFY9 601 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR9K2Q8NGE7 335 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR52N5Q8NH56 324 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 LILRB1Q8NHL6 650 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 STON2Q8WXE9 905 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 HSD17B8Q92506 261 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 AKAP1Q92667 903 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 KTI12Q96EK9 354 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PERPQ96FX8 193 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF385AQ96PM9 386 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CCL19Q99731 98 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 PTDSS2Q9BVG9 487 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TAPBPLQ9BX59 468 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 C1QTNF6Q9BXI9 259 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 HDHD5Q9BXW7 423 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 POTEKPQ9BYX7 375 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM38AQ9H6F2 299 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARMC7Q9H6L4 198 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 SAR1AQ9NR31 198 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC7A10Q9NS82 523 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 NPAP1Q9NZP6 1156 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 RPS6KB2Q9UBS0 482 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 EDARQ9UNE0 448 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 USP22Q9UPT9 525 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CORO2BQ9UQ03 480 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 GMEB1Q9Y692 573 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 ABCA2Q9BZC7 2435 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 LOC100653049A0A140TA62 436 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 CIB4A0PJX0 185 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 DPRXA6NFQ7 191 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 FTCDNL1E5RQL4 147 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 M0QX08 132 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 FXYD1O00168 92 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 HS3ST1O14792 307 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 MRASO14807 208 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SMPD2O60906 423 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 KRT34O76011 436 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 MFN2O95140 757 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 CD3EP07766 207 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 PNMTP11086 282 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 CDH2P19022 906 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 GGT1P19440 569 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 HOXC12P31275 282 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 PCGF2P35227 344 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SELENOPP49908 381 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 GZMMP51124 257 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF83P51522 516 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 MAP2K6P52564 334 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms