RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SQSTM1Q13501 440 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 C1orf140Q5VVS0 124 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 CPEB2Q7Z5Q1 589 aaKnown RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 ZAR1Q86SH2 424 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM99Q8N816 258 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 TRMT10AQ8TBZ6 339 aaKnown RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 C10orf90Q96M02 699 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 ABCG5Q9H222 651 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SP140LQ9H930 580 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 HCKP08631 526 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 C4BPBP20851 252 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF84P51523 738 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SLC26A5P58743 744 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 SIRPAP78324 504 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 MELKQ14680 651 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 C12orf73Q69YU5 71 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 OR7E24Q6IFN5 339 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 RPS19BP1Q86WX3 136 aaKnown RBP12.86□□□□□ -0.35
SCAF4-202ENST00000399804 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 CCDC32Q9BV29 185 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 WWTR1Q9GZV5 400 aa12.86□□□□□ -0.35
SCAF4-202ENST00000399804 FRG2CA6NGY1 282 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 IL33O95760 270 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 CD63P08962 238 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
SCAF4-202ENST00000399804 RAB14P61106 215 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 OR4Q3Q8NH05 313 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 OR52N1Q8NH53 320 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 GPR148Q8TDV2 347 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF775Q96BV0 537 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-202ENST00000399804 BEX2Q9BXY8 128 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 BEX1Q9HBH7 125 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 CACNA1HO95180 2353 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 PRAMEF25A6NGN4 478 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 CSN2P05814 226 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 SHC1P29353 583 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 UGT2B10P36537 528 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 FRKP42685 505 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-202ENST00000399804 MAP2K3P46734 347 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 HCCSP53701 268 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 RNF4P78317 190 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 OR1N1Q8NGS0 311 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 BRIX1Q8TDN6 353 aaKnown RBP12.85□□□□□ -0.35
SCAF4-202ENST00000399804 MENTQ9BUN1 341 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 LAT2Q9GZY6 243 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-202ENST00000399804 ELOVL3Q9HB03 270 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 METTL21EPA6NDL7 271 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 HPGDSO60760 199 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 HOXD12P35452 270 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 SSR4P51571 173 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 NIPAL3Q6P499 406 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 OR5J2Q8NH18 312 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 TSSK2Q96PF2 358 aa12.85□□□□□ -0.35
SCAF4-202ENST00000399804 TCF20Q9UGU0 1960 aaKnown RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 HTR3EA5X5Y0 456 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 HYAL3O43820 417 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CTSBP07858 339 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ITGA5P08648 1049 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 UCHL1P09936 223 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CFL1P23528 166 aaKnown RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 PNLIPRP2P54317 469 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM69Q5SWH9 247 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 FAM199XQ6PEV8 388 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 C16orf47Q6ZP98 133 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 RP1P56715 2156 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CENPFP49454 3210 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 TRAV6A0A075B6T7 132 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 A0A0B4J2E0 115 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 A0A1B0GX12 115 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 METTL15A6NJ78 407 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ACOD1A6NK06 481 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 SELENOFO60613 162 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF432O94892 652 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ICAM2P13598 275 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 DPP4P27487 766 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 EVI2BP34910 448 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 LAX1Q8IWV1 398 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 GALNT6Q8NCL4 622 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms