RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CYBRD1Q53TN4 286 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FBXW9Q5XUX1 488 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CARM1Q86X55 608 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PIK3IP1Q96FE7 263 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TPD52L3Q96J77 140 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CCT8L2Q96SF2 557 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HDHD5Q9BXW7 423 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ALG2Q9H553 416 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ITGB1BP2Q9UKP3 347 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 BAG5Q9UL15 447 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLC7A7Q9UM01 511 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLC9A8Q9Y2E8 581 aa12.45□□□□□ -0.42
HLA-DQB1-202ENST00000399079 M0R082 166 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CHP2O43745 196 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OR2T1O43869 369 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LYPD3O95274 346 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 IL32P24001 234 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GTF2E2P29084 291 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GRPRP30550 384 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 DNAJA1P31689 397 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GSK3BP49841 420 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PSME3P61289 254 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LTBQ06643 244 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FAPQ12884 760 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 C5orf46Q6UWT4 87 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LINC00114Q6XXX2 140 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 DEF8Q6ZN54 512 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 BHLHA15Q7RTS1 189 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 WFDC8Q8IUA0 241 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF417Q8TAU3 575 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LRRC37BQ96QE4 947 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF587Q96SQ5 575 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PCDHAC1Q9H158 963 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ARL8BQ9NVJ2 186 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TRAPPC13A5PLN9 417 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CXCR6O00574 342 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 KLF4O43474 513 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 VAMP5O95183 116 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CNOT4O95628 575 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 IFNA14P01570 189 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PPP3CBP16298 524 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 COX5AP20674 150 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SELENOWP63302 87 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FOXD4Q12950 439 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TAB1Q15750 504 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 C9orf135Q5VTT2 229 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CREB3L2Q70SY1 520 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 EPHX4Q8IUS5 362 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RNF148Q8N7C7 305 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLC7A10Q9NS82 523 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PARPBPQ9NWS1 579 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ASB6Q9NWX5 421 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ABCD2Q9UBJ2 740 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MALT1Q9UDY8 824 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RASD1Q9Y272 281 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 AP3M1Q9Y2T2 418 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CELSR1Q9NYQ6 3014 aa12.43□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GSTA4O15217 222 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FZD7O75084 574 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RAD51DO75771 328 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 DCTN3O75935 186 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GOSR1O95249 250 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 BGLAPP02818 100 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 NCK1P16333 377 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SELENOPP49908 381 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PIN1Q13526 163 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 STK11Q15831 433 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 VTCN1Q7Z7D3 282 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 C10orf53Q8N6V4 93 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TMEM45BQ96B21 275 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 EPYCQ99645 322 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 KCTD14Q9BQ13 255 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PRSS27Q9BQR3 290 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TMEM43Q9BTV4 400 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OR10A4Q9H209 315 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 UPB1Q9UBR1 384 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SNX13Q9Y5W8 968 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MS4A18H0YCH9 400 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 KPNA4O00629 521 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HPRP00739 348 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ITGA5P08648 1049 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms