RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PRDX1Q06830 199 aaKnown RBP13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 LTB4RQ15722 352 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 AGAP7PQ5VUJ5 663 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 AGAP6Q5VW22 663 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 STEAP3Q658P3 488 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 ASB11Q8WXH4 323 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 FRZBQ92765 325 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 C3orf49Q96BT1 292 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 AGAP4Q96P64 663 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 PIGQQ9BRB3 760 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 MED20Q9H944 212 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 RABL2AQ9UBK7 228 aaPredicted RBP13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 RABL2BQ9UNT1 228 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC6A5Q9Y345 797 aa13.21□□□□□ -0.3
PCDHA11-201ENST00000398640 LYRM1O43325 122 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 TSPAN15O95858 294 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 DCAF7P61962 342 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 TNFRSF17Q02223 184 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SELPLGQ14242 412 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 GARNL3Q5VVW2 1013 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PSMF1Q92530 271 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 USP22Q9UPT9 525 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 CYB5BO43169 146 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF254O75437 659 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 TFP02787 698 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SERPINA11Q86U17 422 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 BBS1Q8NFJ9 593 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 KIR3DX1Q9H7L2 352 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC6A20Q9NP91 592 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 POM121BA6NF01 834 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 HPGDSO60760 199 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 IFNA10P01566 189 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 RAB4AP20338 218 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ATP1B3P54709 279 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 RRAS2P62070 204 aaPredicted RBP13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PROX2Q3B8N5 592 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PIWIL3Q7Z3Z3 882 aaKnown RBP13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 OR4F15Q8NGB8 312 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 CCDC32Q9BV29 185 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 CCDC187A0A096LP49 1063 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 HBA1P69905 142 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 GABREP78334 506 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 KCNJ10P78508 379 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 TMEM244Q5VVB8 128 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PLAG1Q6DJT9 500 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 DPY19L2P1Q6NXN4 242 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC35D2Q76EJ3 337 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 CACNG2Q9Y698 323 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF264O43296 627 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 MT-ND4P03905 459 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ALDH3B2P48448 385 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ARL6IP1Q15041 203 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF674Q2M3X9 581 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SLAMF9Q96A28 289 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
PCDHA11-201ENST00000398640 HOXC8P31273 242 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 HTR2BP41595 481 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 VEZF1Q14119 521 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 MEPCEQ7L2J0 689 aaKnown RBP13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 OR8J2Q8NGG1 315 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 SNAPC3Q92966 411 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 TXLNGYQ9BZA5 131 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 TOR1AO14656 332 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 BET1O15155 118 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 ALOX12BO75342 701 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 BMP2P12643 396 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 TRUB1Q8WWH5 349 aaKnown RBP13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 TRIB1Q96RU8 372 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 HES7Q9BYE0 225 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 COL4A1P02462 1669 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 SOCS6O14544 535 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 FCGR2AP12318 317 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 GK3PQ14409 553 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF587Q96SQ5 575 aaPredicted RBP13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 UTS2O95399 124 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 WNT11O96014 354 aa13.19□□□□□ -0.3
PCDHA11-201ENST00000398640 GLB1P16278 677 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms