RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 A0A087WV62 115 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 BORCS7-ASMTA0A0B4J1R7 106 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 H7C1C5 153 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 YY2O15391 372 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 MAKP20794 623 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 LCN6P62502 163 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CSNK2A3Q8NEV1 391 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CNRIP1Q96F85 164 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ATP13A2Q9NQ11 1180 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 MYEF2Q9P2K5 600 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 NEU3Q9UQ49 428 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ACOD1A6NK06 481 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 TP53P04637 393 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 CD22P20273 847 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 FGL2Q14314 439 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 NKAIN1Q4KMZ8 207 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ANKRD34AQ69YU3 496 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAHD1Q6P587 224 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 ANKRD53Q8N9V6 530 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR51T1Q8NGJ9 327 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 WDR76Q9H967 626 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 MED16Q9Y2X0 877 aa13.14□□□□□ -0.31
PCDHGA11-201ENST00000398587 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 TSPAN4O14817 238 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ALOX12BO75342 701 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF35P13682 527 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 CAPZBP47756 277 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 GNMTQ14749 295 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 LAX1Q8IWV1 398 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ARRDC5A6NEK1 342 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 UPK1AO00322 258 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SC5DO75845 299 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SHC1P29353 583 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 FNTBP49356 437 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NKPD1Q17RQ9 610 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF566Q969W8 418 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SYT3Q9BQG1 590 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NRSN2Q9GZP1 204 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 C1orf198Q9H425 327 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NRIP3Q9NQ35 241 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 HMX3A6NHT5 357 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 HRGP04196 525 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 LSSP48449 732 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 CDK10Q15131 360 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC35D2Q76EJ3 337 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMEM179BQ7Z7N9 219 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 CDC6Q99741 560 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 ARHGAP9Q9BRR9 750 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 DPCDQ9BVM2 203 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 CDCA4Q9BXL8 241 aa13.13□□□□□ -0.31
PCDHGA11-201ENST00000398587 FZD7O75084 574 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SERPINA5P05154 406 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 BMP1P13497 986 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SSR4P51571 173 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 LTBQ06643 244 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SMAD2Q15796 467 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 Q499Y3 187 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 MRPL21Q7Z2W9 205 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PXKQ7Z7A4 578 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 GOT1L1Q8NHS2 421 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 Q96M85 177 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 ARPC1BO15143 372 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 MT-ATP6P00846 226 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 FOXK1P85037 733 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 HYAL1Q12794 435 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 CA13Q8N1Q1 262 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms