RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 METTL25Q8N6Q8 603 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ABHD4Q8TB40 342 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ASB17Q8WXJ9 295 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NICN1Q9BSH3 213 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 MS4A8Q9BY19 250 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PIP5K1CO60331 668 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 MT-ND4P03905 459 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 ALDOCP09972 364 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 HEPHL1Q6MZM0 1159 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 CHDHQ8NE62 594 aaPredicted RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 OR4N2Q8NGD1 307 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 OR13C9Q8NGT0 318 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SLC46A1Q96NT5 459 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 ZNF814B7Z6K7 855 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GASTP01350 101 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 PAN3Q58A45 887 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 MKRN2Q9H000 416 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 USP22Q9UPT9 525 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 TAS2R20P59543 309 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 CSNK1G2P78368 415 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 MIB2Q96AX9 1013 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 EPHA5P54756 1037 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GNB1P62873 340 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GABREP78334 506 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 CNTN4Q8IWV2 1026 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SLAMF9Q96A28 289 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SAT2Q96F10 170 aaPredicted RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 TMEM72A0PK05 275 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 AKAIN1P0CW23 69 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 MAKP20794 623 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 MYF6P23409 242 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SLCO4C1Q6ZQN7 724 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 TM4SF18Q96CE8 201 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 HES7Q9BYE0 225 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 ADAM29Q9UKF5 820 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 EMP3P54852 163 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 STT3BQ8TCJ2 826 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 DCLRE1CQ96SD1 692 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 IGHV3-15A0A0B4J1V0 119 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SPDEFO95238 335 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 SERPINA7P05543 415 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 RPA2P15927 270 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 KIAA1024LP59773 190 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 COX20Q5RI15 118 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 hCG_1809904A0A1W2PP81 198 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PPE2 198 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PR64 198 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PRV1 198 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 OR6C6A6NF89 314 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 EFSO43281 561 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GSTP1P09211 210 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 HENMT1Q5T8I9 393 aaKnown RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 GLIPR2Q9H4G4 154 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 IFNA4P05014 189 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GNB3P16520 340 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 GM2AP17900 193 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 RAB15P59190 212 aa10.51□□□□□ -0.73
TTC28-201ENST00000397906 ACSS1Q9NUB1 689 aaPredicted RBP10.51□□□□□ -0.73
TTC28-201ENST00000397906 TRAV36DV7A0A075B6V5 113 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 TACR1P25103 407 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 MFAP5Q13361 173 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 SNAPC3Q92966 411 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 SLC22A5O76082 557 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ZIC2O95409 532 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 EIF4EP06730 217 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 RRAS2P62070 204 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 RAB40BQ12829 278 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ZNF836Q6ZNA1 936 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ATP23Q9Y6H3 246 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 V9GY05 133 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 MYH7BA7E2Y1 1941 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 C7P10643 843 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 LTBQ06643 244 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 LILRA2Q8N149 483 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 TSNAXQ99598 290 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 TAPBPO15533 448 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 PTPN6P29350 595 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 PKLRP30613 574 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ALKBH6Q3KRA9 238 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 PYCR3Q53H96 274 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 PLAG1Q6DJT9 500 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 UFSP2Q9NUQ7 469 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 IDSB3KWA1 339 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 LUMP51884 338 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 HLA-BQ31612 363 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 STEAP2Q8NFT2 490 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 OR51E2Q9H255 320 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 SMOC1Q9H4F8 434 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 TNFSF11O14788 317 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 AGPAT2O15120 278 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 CCR2P41597 374 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ZNF587Q96SQ5 575 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 SDHAF2Q9NX18 166 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 RASD1Q9Y272 281 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 METTL15A6NJ78 407 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 HS3ST1O14792 307 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 HOXC11O43248 304 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms