RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
USF1-202ENST00000368020 B3GLCTQ6Y288 498 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 PRR23CQ6ZRP0 262 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 SMIM19Q96E16 107 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
USF1-202ENST00000368020 ADOQ96SZ5 270 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 NUDT9Q9BW91 350 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 TBL1XR1Q9BZK7 514 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 SLC7A5P2Q9GIP4 190 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 VN1R1Q9GZP7 353 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 MKL2Q9ULH7 1088 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 TBC1D24Q9ULP9 559 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 FRYLO94915 3013 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 FAM186AA6NE01 2351 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 TRAV1-2A0A0B4J238 106 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 PROB1E7EW31 1015 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 FLRT2O43155 660 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 NDUFB5O43674 189 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ICOSLGO75144 302 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 SC5DO75845 299 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 HLA-DQB1P01920 261 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 CYC1P08574 325 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 CLUP10909 449 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 SPI1P17947 270 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 PYCR1P32322 319 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 TALDO1P37837 337 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 TGM4P49221 684 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 CBFBQ13951 182 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 NR0B2Q15466 257 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 TRILQ7L0X0 811 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 NANOGNBQ7Z5D8 188 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.36
USF1-202ENST00000368020 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 GATSQ8NAP1 163 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ABHD4Q8TB40 342 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.36
USF1-202ENST00000368020 NAT6Q93015 286 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 CCDC74AQ96AQ1 378 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 ARSGQ96EG1 525 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 DDOQ99489 341 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 SOSTQ9BQB4 213 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 NCDNQ9UBB6 729 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 USP34Q70CQ2 3546 aa12.77□□□□□ -0.36
USF1-202ENST00000368020 IGLV3-12A0A075B6K2 115 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 A0A1W2PQ09 198 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CDX4O14627 284 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 HCRTR2O43614 444 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 GYPBP06028 91 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CXCR1P25024 350 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 UQCRC1P31930 480 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CENPAP49450 140 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 OR12D2P58182 307 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SIRPAP78324 504 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 EFR3AQ14156 821 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SLC6A19Q695T7 634 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CNIH2Q6PI25 160 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 EID2Q8N6I1 236 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 LRRC17Q8N6Y2 441 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZNF321PQ8N8H1 164 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 C19orf18Q8NEA5 215 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZMYND19Q96E35 227 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 PGLYRP3Q96LB9 341 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 LMF1Q96S06 567 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.76□□□□□ -0.37
USF1-202ENST00000368020 ADAM18Q9Y3Q7 739 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 U3KQA8 63 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SEC16AO15027 2179 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ARPC4-TTLL3A0A0A6YYG9 625 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 OR6C70A6NIJ9 312 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 A8MU76 341 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 BLOC1S5-TXNDC5H3BN57 136 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 TRIM3O75382 744 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 SLC25A12O75746 678 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 TACSTD2P09758 323 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 GP1BBP13224 206 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 TACR3P29371 465 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms