RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 GSTT2P0CG29 244 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 GSTT2BP0CG30 244 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TRAPPC2P0DI81 140 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TRAPPC2BP0DI82 140 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 FUT1P19526 365 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 HNRNPA2B1P22626 353 aaKnown RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.343e-10■■■■■ 55.5
CLCN3-202ENST00000360642 DDOSTP39656 456 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ID2Q02363 134 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 INSL4Q14641 139 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ATAD3CQ5T2N8 411 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PDZK1Q5T2W1 519 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PLBD1Q6P4A8 553 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MEPCEQ7L2J0 689 aaKnown RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PTP4A1Q93096 173 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RADILQ96JH8 1075 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 HS6ST2Q96MM7 605 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CD180Q99467 661 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ADAP2Q9NPF8 381 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MAT2BQ9NZL9 334 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 NDRG2Q9UN36 371 aaKnown RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 N6AMT1Q9Y5N5 214 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 LOC102723971A0A1B0GUV8 181 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF860A6NHJ4 632 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PTP4A3O75365 173 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PIAS2O75928 621 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ITGA5P08648 1049 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CT62P0C5K7 136 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 DRD5P21918 477 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CFL1P23528 166 aaKnown RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 EVX1P49640 407 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CTBP2P56545 445 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 SF3B4Q15427 424 aaKnown RBP eCLIP6.69□□□□□ -1.349e-6■■□□□ 14.4
CLCN3-202ENST00000360642 SHHQ15465 462 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TAB1Q15750 504 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RSPO4Q2I0M5 234 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM31Q5JXX7 168 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 NKAPLQ5M9Q1 402 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF362Q5T0B9 420 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 GARNL3Q5VVW2 1013 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RSBN1Q5VWQ0 802 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 H1FNTQ75WM6 255 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 KLBQ86Z14 1044 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CA13Q8N1Q1 262 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ATP6V1C2Q8NEY4 427 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 OR51G2Q8NGK0 314 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 OR10G6Q8NH81 332 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 NEIL3Q8TAT5 605 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 FANK1Q8TC84 345 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 THAP4Q8WY91 577 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 HCAR1Q9BXC0 346 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MMP28Q9H239 520 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 SYNDIG1Q9H7V2 258 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TBC1D17Q9HA65 648 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF221Q9UK13 617 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 SIRT4Q9Y6E7 314 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 LRP4O75096 1905 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CFAP54Q96N23 3096 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 LRRC72A6NJI9 287 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 B4DXG7 233 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RNF13O43567 381 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 GALR3O60755 368 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 HPGDSO60760 199 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 AK1P00568 194 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MEOX1P50221 254 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 YPEL5P62699 121 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 PYDC2Q56P42 97 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RPL13AP3Q6NVV1 102 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM53Q6P2H8 277 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CNIH2Q6PI25 160 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 B3GLCTQ6Y288 498 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MARCH9Q86YJ5 346 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ACBD7Q8N6N7 88 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 COX18Q8N8Q8 333 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 OR5T3Q8NGG3 340 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 RERGQ96A58 199 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ANKRD9Q96BM1 317 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 DPYSL5Q9BPU6 564 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 MEPEQ9NQ76 525 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CMC2Q9NRP2 79 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 BABAM2Q9NXR7 383 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 COMMD3Q9UBI1 195 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 SIGLEC7Q9Y286 467 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 ENTPD2Q9Y5L3 495 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 NPIPA5A0A0B4J1W7 369 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 LINC00854A0A1B0GVQ3 168 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 CCDC182A6NF36 153 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 CD8B2A6NJW9 211 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 C12orf71A8MTZ7 269 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 C2orf74A8MZ97 194 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NPIPA7E9PJI5 369 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 GTPBP1O00178 669 aaKnown RBP6.68□□□□□ -1.34
CLCN3-202ENST00000360642 HCN1O60741 890 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NCR1O76036 304 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 GUSBP08236 651 aa6.68□□□□□ -1.34
CLCN3-202ENST00000360642 NPIPA8P0DM63 369 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms