RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TEX13CA0A0J9YWL9 993 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 OR6C68A6NDL8 312 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 NUDT14O95848 222 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 DLGAP3O95886 979 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 SERPINA3P01011 423 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 TFP02787 698 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 CFIP05156 583 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 CD1AP06126 327 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 CYC1P08574 325 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 POLR2HP52434 150 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 SLC26A5P58743 744 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 GLYR1Q49A26 553 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 GXYLT1Q4G148 440 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 GPR139Q6DWJ6 353 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 DMKNQ6E0U4 476 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 PWWP2BQ6NUJ5 590 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 LEG1Q6P5S2 330 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 METAP1DQ6UB28 335 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 FAM131AQ6UXB0 335 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 PAMR1Q6UXH9 720 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 SHISA6Q6ZSJ9 500 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 FAM122BQ7Z309 247 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 TPRA1Q86W33 373 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 EID2Q8N6I1 236 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 GDPD1Q8N9F7 314 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 NFAM1Q8NET5 270 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 NUBPLQ8TB37 319 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 ACOT12Q8WYK0 555 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 Q96M85 177 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 ADAM30Q9UKF2 790 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 FABP12A6NFH5 140 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 E9PI62 339 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 OGG1O15527 345 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 SLC25A12O75746 678 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 MT-ATP6P00846 226 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 BGLAPP02818 100 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 PTBP1P26599 531 aaKnown RBP eCLIP16.64■□□□□ 0.255e-12■■■■■ 40.8
PDLIM7-203ENST00000359895 HOXD12P35452 270 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 LTBQ06643 244 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 RPL18Q07020 188 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 C5orf46Q6UWT4 87 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 PPP1R3BQ86XI6 285 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 SLC38A9Q8NBW4 561 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 LSM14AQ8ND56 463 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 ABHD4Q8TB40 342 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 KTI12Q96EK9 354 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 LPAR4Q99677 370 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 ATF6BQ99941 703 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 NPFFR2Q9Y5X5 522 aa16.64■□□□□ 0.25
PDLIM7-203ENST00000359895 VSTM2BA6NLU5 285 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 SCO2O43819 266 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 TIAF1O95411 115 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 MYL9P24844 172 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 PYCR1P32322 319 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 NAA10P41227 235 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 HTR3AP46098 478 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 EMP2P54851 167 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 SLC3A1Q07837 685 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 ZNF79Q15937 498 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 CCDC58Q4VC31 144 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 ZNF385CQ66K41 422 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 SSX6Q7RTT6 188 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 MAMDC2Q7Z304 686 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 EGFL6Q8IUX8 553 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 TEX19Q8NA77 164 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 OR5J2Q8NH18 312 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 OR8K3Q8NH51 312 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 CEP76Q8TAP6 659 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 SNX33Q8WV41 574 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 TAAR8Q969N4 342 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 ZNF524Q96C55 264 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 NEURL2Q9BR09 285 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 FSCN3Q9NQT6 498 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 GRHPRQ9UBQ7 328 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 ST6GALNAC2Q9UJ37 374 aa16.63■□□□□ 0.25
PDLIM7-203ENST00000359895 IGHV3-20A0A0C4DH32 117 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 KHNYNO15037 678 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 CER1O95813 267 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 NAGAP17050 411 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 CDKN2AP42771 156 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 RPS5P46782 204 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 DUSP3P51452 185 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 CAV3P56539 151 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 E2F1Q01094 437 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 SIGLEC14Q08ET2 396 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 QPRTQ15274 297 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 TP53I3Q53FA7 332 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 RPL22L1Q6P5R6 122 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 GRINAQ7Z429 371 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 EXD3Q8N9H8 876 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 OR51L1Q8NGJ5 315 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 OR5L2Q8NGL0 311 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 OR6K6Q8NGW6 343 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 GPR119Q8TDV5 335 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 TMEM234Q8WY98 164 aa16.62■□□□□ 0.25
PDLIM7-203ENST00000359895 HTRA1Q92743 480 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms